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L3_058_000G1_scaffold_1513

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_1513_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(259..522)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=3 Tax=Clostridium RepID=E7GJ51_CLOSY
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
30S ribosomal protein S20
L3_058_000G1_scaffold_1513_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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737..1762
DNA (1026bp) protein (342aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=3 Tax=Clostridium symbiosum RepID=E7GJ50_CLOSY
L3_058_000G1_scaffold_1513_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2077..3540
DNA (1464bp) protein (488aa)
Stage II sporulation protein P n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C904_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07354.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
stage II sporulation protein P
L3_058_000G1_scaffold_1513_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3546..3701)
DNA (156bp) protein (52aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8F6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07355.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
membrane-associated CAAX amino terminal protease
L3_058_000G1_scaffold_1513_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3698..4483)
DNA (786bp) protein (262aa)
CAAX amino protease n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ48_CLOSY
CAAX amino protease {ECO:0000313|EMBL:EGA95156.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative membrane-membrane-associated CAAX aminoterminal protease
L3_058_000G1_scaffold_1513_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4959..5537
DNA (579bp) protein (193aa)
Transcription antiterminator n=5 Tax=Clostridium RepID=E7GJ47_CLOSY
Transcription antiterminator {ECO:0000313|EMBL:EGA95216.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Transcription antiterminator
L3_058_000G1_scaffold_1513_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5687..6250
DNA (564bp) protein (188aa)
Transcription termination/antitermination factor NusG n=2 Tax=Clostridium symbiosum RepID=E9SNH0_CLOSY
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:ERI80500.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Transcription antiterminator
L3_058_000G1_scaffold_1513_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6276..6893
DNA (618bp) protein (206aa)
Bacterial sugar transferase n=3 Tax=Clostridium RepID=U2BQS5_CLOSY
Bacterial sugar transferase {ECO:0000313|EMBL:ERI80499.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Sugar transferases involved in lipopolysaccharide synthesis
L3_058_000G1_scaffold_1513_9
Enterococcus casseliflavus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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6913..7758
DNA (846bp) protein (282aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Enterococcus casseliflavus EC10 RepID=C9CHZ2_ENTCA
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EEV34949.1}; TaxID=565654 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus casseliflavus EC10.;"
L3_058_000G1_scaffold_1513_10
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7787..8569
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE79980.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
family 2 glycosyl transferase
L3_058_000G1_scaffold_1513_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8618..9778
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ40_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95209.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
CDP-glycerol:poly(glycerophosphate)glycerophosphotransferase
L3_058_000G1_scaffold_1513_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9840..10988
DNA (1149bp) protein (383aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SNG3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80493.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_000G1_scaffold_1513_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11128..12186
DNA (1059bp) protein (353aa)
Histidinol-phosphate transaminase (EC:2.6.1.9)
Putative histidinol-phosphate transaminase n=2 Tax=Clostridium symbiosum RepID=E9SNG2_CLOSY
Putative histidinol-phosphate transaminase {ECO:0000313|EMBL:ERI80492.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000G1_scaffold_1513_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12192..12911
DNA (720bp) protein (240aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8G8_9CLOT
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_058_000G1_scaffold_1513_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12947..13480
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07288.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain.
L3_058_000G1_scaffold_1513_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13434..14546
DNA (1113bp) protein (371aa)
Thiamine pyrophosphate enzyme n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ35_CLOSY
Thiamine pyrophosphate enzyme {ECO:0000313|EMBL:EGA95204.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain./Thiamine pyrophosphate enzyme, central domain.
L3_058_000G1_scaffold_1513_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14616..15677
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F8H1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07290.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glycosyl transferase family 2
L3_058_000G1_scaffold_1513_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15856..16932
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ33_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95202.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
lipopolysaccharide biosynthesis protein-like protein
L3_058_000G1_scaffold_1513_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16935..18158
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ32_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95201.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
polysaccharide pyruvyl transferase family protein
L3_058_000G1_scaffold_1513_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18162..19313
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ31_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95200.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Coenzyme F420-reducing hydrogenase, beta subunit
L3_058_000G1_scaffold_1513_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19356..20336
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ30_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95199.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_1513_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20370..21218
DNA (849bp) protein (283aa)
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ29_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95198.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_1513_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21229..21909
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ28_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95197.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_1513_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21926..23470
DNA (1545bp) protein (515aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ27_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95196.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Flippase
L3_058_000G1_scaffold_1513_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23504..24127
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ26_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95195.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
acetyl transferase
L3_058_000G1_scaffold_1513_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24142..24738
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GJ25_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95194.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_1513_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25924..27738
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Elongation factor 4 n=4 Tax=Clostridium RepID=E7GJ23_CLOSY
GTP-binding protein LepA
L3_058_000G1_scaffold_1513_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27777..28961
DNA (1185bp) protein (395aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=2 Tax=Clostridium symbiosum RepID=U2DG89_CLOSY
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:ERI80482.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000G1_scaffold_1513_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29263..30024
DNA (762bp) protein (254aa)
Membrane family protein n=4 Tax=Clostridium RepID=E7GJ21_CLOSY
Membrane family protein {ECO:0000313|EMBL:EGA95190.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted permeases
L3_058_000G1_scaffold_1513_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30381..31337
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium RepID=E9SNF2_CLOSY
Displaying items 1-30 of 35 in total

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