ggKbase home page

L3_058_000G1_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_271_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(183..317)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04479.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_271_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1077..1268)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SL42_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04478.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_271_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1533..8789)
DNA (7257bp) protein (2419aa)
LysM domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SL41_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04477.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9022..9693
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=E9SL40_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04476.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Two-component response regulator
L3_058_000G1_scaffold_271_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9715..11700)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SL39_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04475.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
clfB; clumping factor B (ClfB)
L3_058_000G1_scaffold_271_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11732..13789
DNA (2058bp) protein (686aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGI0_9CLOT
two-component sensor histidine kinase
L3_058_000G1_scaffold_271_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14137..16944)
DNA (2808bp) protein (936aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SL37_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04507.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
signal transduction histidine kinase
L3_058_000G1_scaffold_271_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16975..18840)
DNA (1866bp) protein (622aa)
5'-nucleotidase, C-terminal domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SL36_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04506.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_058_000G1_scaffold_271_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18854..20986)
DNA (2133bp) protein (711aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04505.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
histidine kinase
L3_058_000G1_scaffold_271_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21064..22533)
DNA (1470bp) protein (490aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04503.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
regulatory protein GntR
L3_058_000G1_scaffold_271_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22508..24601)
DNA (2094bp) protein (698aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04502.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
diguanylate cyclase (GGDEF) domain
L3_058_000G1_scaffold_271_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24896..25144)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04501.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25197..25445)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9SL32_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91553.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_271_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25999..26457)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SL30_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91550.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_271_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26558..27319)
DNA (762bp) protein (254aa)
Iron-sulfur protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GUJ2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04498.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ferredoxin
L3_058_000G1_scaffold_271_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27428..27940)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GUJ1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91548.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
GCN5-related N-acetyltransferase
L3_058_000G1_scaffold_271_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27924..28025)
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04496.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_271_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28091..28456)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SL26_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04495.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28685..29407)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04494.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29447..30031)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04493.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30048..30374)
DNA (327bp) protein (109aa)
RNA polymerase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GUI7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04492.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative RNA polymerase ECF subfamily sigma factor
L3_058_000G1_scaffold_271_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30886..31533)
DNA (648bp) protein (216aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium RepID=E9SL17_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04491.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
N-acetyltransferase GCN5
L3_058_000G1_scaffold_271_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31548..31883)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2B856_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04490.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_271_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31919..33226)
DNA (1308bp) protein (436aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SL15_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04489.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
GGDEF domain-containing protein
L3_058_000G1_scaffold_271_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33223..36384)
DNA (3162bp) protein (1054aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04488.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36397..39996)
DNA (3600bp) protein (1200aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04487.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39984..42566)
DNA (2583bp) protein (861aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04486.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42816..44321
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04485.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_271_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44563..45321)
DNA (759bp) protein (253aa)
ABC transporter n=2 Tax=Clostridium symbiosum RepID=E7GUI3_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI74313.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter ATP-binding protein
L3_058_000G1_scaffold_271_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45324..46439)
DNA (1116bp) protein (372aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2CYM4_CLOSY
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI74312.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ABC transporter permease
Displaying items 1-30 of 83 in total

View Taxonomy