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L3_058_000G1_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_489_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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381..896
DNA (516bp) protein (172aa)
N utilization substance protein B homolog n=4 Tax=Clostridium RepID=E7GM15_CLOSY
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
transcription antitermination factor NusB
L3_058_000G1_scaffold_489_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

900..2114
DNA (1215bp) protein (405aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB18_9CLOT
L3_058_000G1_scaffold_489_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2132..2410
DNA (279bp) protein (93aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Exodeoxyribonuclease 7 small subunit n=4 Tax=Clostridium RepID=E9SR87_CLOSY
Exonuclease VII small subunit.
L3_058_000G1_scaffold_489_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2410..3294
DNA (885bp) protein (295aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06358.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_489_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3370..5259
DNA (1890bp) protein (630aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB15_9CLOT
deoxyxylulose-5-phosphate synthase
L3_058_000G1_scaffold_489_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5256..6065
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase J n=3 Tax=Clostridium RepID=E9SR84_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06356.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hemolysin TlyA family protein
L3_058_000G1_scaffold_489_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6103..6951
DNA (849bp) protein (283aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=4 Tax=Clostridium RepID=E7GM21_CLOSY
L3_058_000G1_scaffold_489_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7207..7656
DNA (450bp) protein (150aa)
Arginine repressor n=4 Tax=Clostridium RepID=E7GM22_CLOSY
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, ArgR family
L3_058_000G1_scaffold_489_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7668..9341
DNA (1674bp) protein (558aa)
DNA repair protein RecN n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB11_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA replication and repair protein RecN
L3_058_000G1_scaffold_489_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9338..10699
DNA (1362bp) protein (454aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=E9SR80_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06352.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
transcriptional regulator, GntR family
L3_058_000G1_scaffold_489_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10776..11462
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06351.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_489_12
unknown

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11570..11824
DNA (255bp) protein (85aa)

This feature has no annotations

L3_058_000G1_scaffold_489_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11809..12648
DNA (840bp) protein (280aa)
Phage integrase family Integrase/recombinase n=2 Tax=Clostridium RepID=E7GM27_CLOSY
Phage integrase family Integrase/recombinase {ECO:0000313|EMBL:EGA94203.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
integrase family protein
L3_058_000G1_scaffold_489_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13150..14361
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SR77_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06497.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_489_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14533..15048
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06496.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_489_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15197..15412
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2BWX5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94206.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_489_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15452..20176
DNA (4725bp) protein (1575aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06494.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
von Willebrand factor type A domain.
L3_058_000G1_scaffold_489_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20213..20737
DNA (525bp) protein (175aa)
Signal peptidase I n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D5I5_CLOSY
Signal peptidase I {ECO:0000313|EMBL:ERI76727.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
signal peptidase I
L3_058_000G1_scaffold_489_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20721..21392
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06492.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_489_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21493..22098
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FB00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06491.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_489_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22168..22791
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SR71_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94099.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_489_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22902..23798
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06489.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_489_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23883..24677
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06488.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
sortase, SrtB family
L3_058_000G1_scaffold_489_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24672..26090)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GM39_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06487.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Bacillus/Clostridium GerA spore germination protein.
L3_058_000G1_scaffold_489_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26443..27561
DNA (1119bp) protein (373aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SR67_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06486.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_489_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27575..28339
DNA (765bp) protein (255aa)
ThiF family protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GM41_CLOSY
ThiF family protein {ECO:0000313|EMBL:EGA94104.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L3_058_000G1_scaffold_489_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28356..29717
DNA (1362bp) protein (454aa)
MATE efflux family protein n=2 Tax=Clostridium RepID=U2C7Z0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06484.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative efflux protein, MATE family
L3_058_000G1_scaffold_489_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29906..31825
DNA (1920bp) protein (640aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=3 Tax=Clostridium RepID=U2DLQ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94106.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_489_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31852..32652
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06482.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
rRNA methylases
L3_058_000G1_scaffold_489_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32799..33233
DNA (435bp) protein (145aa)
Nodulation efficiency protein D n=2 Tax=Clostridium RepID=U2C9D8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06481.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Membrane protein implicated in regulation of membrane protease activity
Displaying items 1-30 of 106 in total

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