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L3_058_000G1_scaffold_708

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_708_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(201..929)
DNA (729bp) protein (243aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.-.- 2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Clostridium RepID=E7GSD7_CLOSY
L3_058_000G1_scaffold_708_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(952..2874)
DNA (1923bp) protein (641aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJM6_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
glucose-inhibited division protein A
L3_058_000G1_scaffold_708_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3004..4383)
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
tRNA modification GTPase MnmE n=2 Tax=Clostridium symbiosum RepID=E9SUB9_CLOSY
tRNA modification GTPase trmE
L3_058_000G1_scaffold_708_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4564..5232)
DNA (669bp) protein (223aa)
R3H domain protein n=5 Tax=Clostridium RepID=E9SUB8_CLOSY
Probable RNA-binding protein {ECO:0000313|PDB:3GKU}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted RNA-binding protein
L3_058_000G1_scaffold_708_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5245..6489)
DNA (1245bp) protein (415aa)
SpoJ protein n=3 Tax=Clostridium symbiosum RepID=E7GSD3_CLOSY
SpoJ protein {ECO:0000313|EMBL:EGA92276.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_058_000G1_scaffold_708_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6714..7097)
DNA (384bp) protein (128aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=3 Tax=Clostridium RepID=G5FJN0_9CLOT
L3_058_000G1_scaffold_708_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7116..7250)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=4 Tax=Clostridium RepID=E7GSD0_CLOSY
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
LSU ribosomal protein L34P
L3_058_000G1_scaffold_708_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7374..9464)
DNA (2091bp) protein (697aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUB3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92272.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative sigma-54 specific transcriptional regulator
L3_058_000G1_scaffold_708_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9470..9991)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SUB2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92271.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_708_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10252..11856
DNA (1605bp) protein (535aa)
gamma-glutamyltranspeptidase (EC:2.3.2.2)
Putative gamma-glutamyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUB1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92270.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_708_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11884..12438
DNA (555bp) protein (185aa)
Chromate transport protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUB0_CLOSY
Chromate transporter {ECO:0000313|EMBL:EGA92269.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
chromate transporter
L3_058_000G1_scaffold_708_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12435..13001
DNA (567bp) protein (189aa)
Chromate transporter n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSC5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03438.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
chromate transporter
L3_058_000G1_scaffold_708_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13549..14919
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=4 Tax=Clostridium RepID=E7GSC4_CLOSY
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
chromosomal replication initiator protein DnaA
L3_058_000G1_scaffold_708_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15178..16296
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=3 Tax=Clostridium RepID=E7GSC3_CLOSY
L3_058_000G1_scaffold_708_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16310..16519
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SUA6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03441.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_708_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16532..17614
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=2 Tax=Clostridium symbiosum RepID=E7GSC1_CLOSY
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA replication and repair protein RecF
L3_058_000G1_scaffold_708_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17631..19544
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Clostridium symbiosum RepID=U2BKI7_CLOSY
L3_058_000G1_scaffold_708_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19651..22203
DNA (2553bp) protein (851aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=3 Tax=Clostridium symbiosum RepID=E7GSB9_CLOSY
L3_058_000G1_scaffold_708_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22368..23210
DNA (843bp) protein (281aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=2 Tax=Clostridium RepID=E9SUA2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03445.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_708_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23288..23839
DNA (552bp) protein (184aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=4 Tax=Clostridium RepID=U2DGD9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03446.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_708_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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23855..24979
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57580.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
NLP/P60 protein
L3_058_000G1_scaffold_708_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25019..26275
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VJY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90734.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Putative cell wall binding repeat.
L3_058_000G1_scaffold_708_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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26287..27483
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X4C0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90733.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
cell wall binding repeat-containing protein
L3_058_000G1_scaffold_708_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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27608..27913
DNA (306bp) protein (102aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WT86_9CLOT
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
flagellar hook-basal body complex protein FliE
L3_058_000G1_scaffold_708_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27939..29546
DNA (1608bp) protein (536aa)
Flagellar M-ring protein FliF n=2 Tax=Clostridium RepID=D3ALX5_9CLOT
Flagellar M-ring protein FliF {ECO:0000313|EMBL:EFC97172.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
fliF; flagellar M-ring protein FliF
L3_058_000G1_scaffold_708_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29548..30564
DNA (1017bp) protein (339aa)
Flagellar motor switch protein FliG n=2 Tax=Clostridium RepID=D3ALX6_9CLOT
Flagellar motor switch protein FliG {ECO:0000313|EMBL:EHE97191.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
flagellar motor switch protein FliG
L3_058_000G1_scaffold_708_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30557..31318
DNA (762bp) protein (254aa)
Flagellar assembly protein FliH n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ALX7_9CLOT
Flagellar assembly protein FliH {ECO:0000313|EMBL:EFC97174.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
fliH; flagellar assembly protein FliH
L3_058_000G1_scaffold_708_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31330..32634
DNA (1305bp) protein (435aa)
type III secretion system ATPase, FliI/YscN (EC:3.6.3.14 3.6.3.15)
Flagellar protein export ATPase FliI n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5THA1_9CLOT
Flagellar protein export ATPase FliI {ECO:0000313|EMBL:CCZ62669.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_058_000G1_scaffold_708_29
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32663..33124
DNA (462bp) protein (154aa)
Flagellar export protein FliJ n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K3Y3_9FIRM
Flagellar export protein FliJ {ECO:0000313|EMBL:EGN44750.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
flagellar export protein FliJ
L3_058_000G1_scaffold_708_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33174..34565
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X4X7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90726.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
flagellar hook-length control protein
Displaying items 1-30 of 71 in total

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