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L3_058_000G1_scaffold_4318

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_4318_1
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(167..1315)
DNA (1149bp) protein (383aa)
FAD dependent oxidoreductase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H7_PSEDT
FAD dependent oxidoreductase {ECO:0000313|EMBL:EGC00097.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
FAD dependent oxidoreductase
L3_058_000G1_scaffold_4318_2
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1319..1708)
DNA (390bp) protein (130aa)
Type IV pili biogenesis protein PilE n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H6_PSEDT
Type IV pili biogenesis protein PilE {ECO:0000313|EMBL:EGC00096.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
type IV pili biogenesis protein PilE
L3_058_000G1_scaffold_4318_3
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1710..2177)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H5_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGC00095.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_4318_4
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2174..2812)
DNA (639bp) protein (213aa)
Type IV pilus assembly protein PilW n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H4_PSEDT
Type IV pilus assembly protein PilW {ECO:0000313|EMBL:EGC00094.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_4318_5
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2809..2991)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H3_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGC00093.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
type IV pilus modification protein PilV
L3_058_000G1_scaffold_4318_6
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3102..3590
DNA (489bp) protein (163aa)
Putative type 4 pili biogenesis protein FimT n=1 Tax=Pseudomonas putida NBRC 14164 RepID=T2HC32_PSEPU
Type IV pili biogenesis protein FimT {ECO:0000313|EMBL:KIY42059.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
fimT; putative type 4 pili biogenesis protein FimT
L3_058_000G1_scaffold_4318_7
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3651..4598)
DNA (948bp) protein (316aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H2_PSEDT
L3_058_000G1_scaffold_4318_8
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4613..5050)
DNA (438bp) protein (146aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0H1_PSEDT
fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase FkpB
L3_058_000G1_scaffold_4318_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5043..5558)
DNA (516bp) protein (172aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=231023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida ND6.;"
Lipoprotein signal peptidase n=7 Tax=Pseudomonas RepID=LSPA_PSEPK
lipoprotein signal peptidase
L3_058_000G1_scaffold_4318_10
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5551..8382)
DNA (2832bp) protein (944aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
ileS; protein IleS (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0G9_PSEDT
L3_058_000G1_scaffold_4318_11
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8379..9329)
DNA (951bp) protein (317aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0G8_PSEDT
bifunctional riboflavin kinase/FMN adenylyltransferase
L3_058_000G1_scaffold_4318_12
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9448..10986)
DNA (1539bp) protein (513aa)
Integral membrane protein MviN n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0G7_PSEDT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
integral membrane protein MviN
L3_058_000G1_scaffold_4318_13
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11237..11515
DNA (279bp) protein (93aa)
30S ribosomal protein S20 n=20 Tax=Pseudomonas RepID=RS20_PSEE4
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
L3_058_000G1_scaffold_4318_14
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11665..13965)
DNA (2301bp) protein (767aa)
Mce-related protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0G5_PSEDT
Mce-related protein {ECO:0000313|EMBL:EGC00085.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_4318_15
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13958..14581)
DNA (624bp) protein (208aa)
Paraquat-inducible protein A n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0G4_PSEDT
Paraquat-inducible protein A {ECO:0000313|EMBL:EGC00084.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
paraquat-inducible protein A
L3_058_000G1_scaffold_4318_16
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14568..15227)
DNA (660bp) protein (220aa)
Paraquat-inducible protein A n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E0G3_PSEDT
Paraquat-inducible protein A {ECO:0000313|EMBL:EGC00083.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
paraquat-inducible protein A
L3_058_000G1_scaffold_4318_17
unknown

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comp(15255..15446)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 17 items

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