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L3_058_000G1_scaffold_2982

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_2982_1
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..135
DNA (135bp) protein (45aa)
Cro/CI family transcriptional regulator n=1 Tax=Pseudomonas syringae pv. aesculi str. 0893_23 RepID=F3DLN7_9PSED
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:EGH05248.1}; TaxID=629258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. aesculi str. 0893_23.;"
L3_058_000G1_scaffold_2982_2
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217..1182)
DNA (966bp) protein (322aa)
Histidine kinase n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7DC38_9PSED
Histidine kinase {ECO:0000313|EMBL:ESW39065.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
multi-sensor hybrid histidine kinase
L3_058_000G1_scaffold_2982_3
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1131..2423)
DNA (1293bp) protein (431aa)
Histidine kinase/response regulator hybrid protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E1C4_PSEDT
Histidine kinase/response regulator hybrid protein {ECO:0000313|EMBL:EGB99792.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Two component sensor kinase/response regulator hybrid
L3_058_000G1_scaffold_2982_4
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2584..2964
DNA (381bp) protein (127aa)
MutT/nudix family protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E1C3_PSEDT
MutT/nudix family protein {ECO:0000313|EMBL:EGB99791.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
DNA mismatch repair protein MutT
L3_058_000G1_scaffold_2982_5
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3070..3360)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7DBI8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ESW39063.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
hypothetical protein
L3_058_000G1_scaffold_2982_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3906..4358)
DNA (453bp) protein (151aa)
ATP-dependent DNA ligase {ECO:0000313|EMBL:ENY79575.1}; EC=6.5.1.1 {ECO:0000313|EMBL:ENY79575.1};; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
ATP-dependent DNA ligase n=1 Tax=Pseudomonas putida TRO1 RepID=N9UMA8_PSEPU
L3_058_000G1_scaffold_2982_7
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4578..5780
DNA (1203bp) protein (401aa)
Alcohol dehydrogenase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0DYE6_PSEDT
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AJG13569.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
L3_058_000G1_scaffold_2982_8
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5794..6027
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E1B9_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB99787.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_2982_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6061..6213
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida H8234 RepID=R9VCN9_PSEPU
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:AGN81838.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
L3_058_000G1_scaffold_2982_10
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6262..6564)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E1B8_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB99786.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_2982_11
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6985..7203
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=N9UMG8_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:ENY79569.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
stress-induced protein
L3_058_000G1_scaffold_2982_12
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7263..8606)
DNA (1344bp) protein (448aa)
Sodium:proton antiporter n=1 Tax=Pseudomonas putida H8234 RepID=R9VAK3_PSEPU
membrane transport
Membrane transport {ECO:0000313|EMBL:AJG13565.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
L3_058_000G1_scaffold_2982_13
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8772..9188
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E1B3_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB99796.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
membrane protein
L3_058_000G1_scaffold_2982_14
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9185..9619)
DNA (435bp) protein (145aa)
Response regulator receiver protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E1B2_PSEDT
Response regulator receiver protein {ECO:0000313|EMBL:EGB99795.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
response regulator receiver protein
L3_058_000G1_scaffold_2982_15
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9756..10064
DNA (309bp) protein (103aa)
ISPsy24, transposase OrfA n=2 Tax=Pseudomonas RepID=F8FWW6_PSEPU
OrfA, transposase
OrfA, transposase {ECO:0000313|EMBL:AJG13599.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
L3_058_000G1_scaffold_2982_16
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10061..10918
DNA (858bp) protein (286aa)
Transposase n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D597_9PSED
Transposase {ECO:0000313|EMBL:ESW36680.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
ISPsy24, transposase OrfB
L3_058_000G1_scaffold_2982_17
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10922..11221)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6E9_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB98016.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_2982_18
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11305..12360)
DNA (1056bp) protein (352aa)
Peptidase M42 family protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6E8_PSEDT
Peptidase M42 family protein {ECO:0000313|EMBL:EGB98015.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
peptidase M42
L3_058_000G1_scaffold_2982_19
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12385..12909)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6E7_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB98014.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
membrane protein
L3_058_000G1_scaffold_2982_20
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13106..13963
DNA (858bp) protein (286aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6E6_PSEDT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGB98013.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
oxidoreductase
L3_058_000G1_scaffold_2982_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14017..14178)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KFH1_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY98894.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
L3_058_000G1_scaffold_2982_22
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14332..14835
DNA (504bp) protein (168aa)
CinA domain-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6E5_PSEDT
CinA domain-containing protein {ECO:0000313|EMBL:EGB98012.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
CinA domain-containing protein
L3_058_000G1_scaffold_2982_23
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14847..15353
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KFH3_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY98896.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
L3_058_000G1_scaffold_2982_24
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15363..15806
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=N9UMF2_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:ENY79554.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
hypothetical protein
L3_058_000G1_scaffold_2982_25
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15841..16074)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D7E1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ESW37608.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
hypothetical protein
L3_058_000G1_scaffold_2982_26
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16262..18076
DNA (1815bp) protein (605aa)
Glycoside hydrolase 15-related protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6E0_PSEDT
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:EGB98069.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
glycoside hydrolase 15-related
L3_058_000G1_scaffold_2982_27
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18170..18634
DNA (465bp) protein (155aa)
Hemerythrin HHE cation binding domain-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6D9_PSEDT
Hemerythrin HHE cation binding domain-containing protein {ECO:0000313|EMBL:EGB98068.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hemerythrin
L3_058_000G1_scaffold_2982_28
unknown

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18740..18976
DNA (237bp) protein (79aa)
hypothetical protein
L3_058_000G1_scaffold_2982_29
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19062..19400)
DNA (339bp) protein (113aa)
Alcohol dehydrogenase n=1 Tax=Pseudomonas putida TRO1 RepID=N9UME8_PSEPU
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:ENY79549.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
L3_058_000G1_scaffold_2982_30
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19500..20201)
DNA (702bp) protein (234aa)
Alcohol dehydrogenase n=1 Tax=Pseudomonas putida TRO1 RepID=N9UME8_PSEPU
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:ENY79549.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
Displaying items 1-30 of 33 in total

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