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L3_058_000G1_scaffold_3178

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_3178_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

L3_058_000G1_scaffold_3178_2
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(196..1083)
DNA (888bp) protein (296aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; Flags: Fragment;; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Glutamyl-Q tRNA(Asp) synthetase (Fragment) n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA37_PSEDT
glutamyl-Q tRNA(Asp) synthetase
L3_058_000G1_scaffold_3178_3
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1147..1593)
DNA (447bp) protein (149aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA38_PSEDT
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
molecular chaperone DnaK
L3_058_000G1_scaffold_3178_4
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1804..2976
DNA (1173bp) protein (391aa)
Aminotransferase n=1 Tax=Pseudomonas putida H8234 RepID=R9V6N2_PSEPU
Aminotransferase {ECO:0000313|EMBL:KIY37808.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
hypothetical protein
L3_058_000G1_scaffold_3178_5
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2976..3689
DNA (714bp) protein (238aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA41_PSEDT
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
sfsA; sugar fermentation stimulation protein A
L3_058_000G1_scaffold_3178_6
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3679..3996)
DNA (318bp) protein (106aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA42_PSEDT
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:EGB96717.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Rieske (2Fe-2S) domain-containing protein
L3_058_000G1_scaffold_3178_7
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4147..5028
DNA (882bp) protein (294aa)
Periplasmic binding protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA43_PSEDT
Periplasmic binding protein {ECO:0000313|EMBL:EGB96718.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
putative hemin ABC transporter substrate-binding protein
L3_058_000G1_scaffold_3178_8
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5025..6062
DNA (1038bp) protein (346aa)
ABC transporter permease n=1 Tax=Pseudomonas monteilii RepID=UPI00031B581E
putative hemin ABC transporter permease protein
Putative hemin ABC transporter permease protein {ECO:0000313|EMBL:BAN56519.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
L3_058_000G1_scaffold_3178_9
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6062..6829
DNA (768bp) protein (256aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Hemin importer ATP-binding subunit n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA46_PSEDT
hemin ABC transporter ATP-binding protein
L3_058_000G1_scaffold_3178_10
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6881..7765
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA47_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB96703.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_3178_11
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7947..8225)
DNA (279bp) protein (93aa)
TfoX domain-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA48_PSEDT
TfoX domain-containing protein {ECO:0000313|EMBL:EGB96704.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
competence protein TfoX
L3_058_000G1_scaffold_3178_12
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8463..10025)
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA49_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB96705.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_3178_13
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10141..12462
DNA (2322bp) protein (774aa)
penicillin-binding protein 1B (EC:2.4.1.129)
Penicillin-binding protein 1B n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA50_PSEDT
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
L3_058_000G1_scaffold_3178_14
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12478..13281
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA51_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB96707.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_3178_15
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13281..13613
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA52_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB96708.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_3178_16
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13947..15746
DNA (1800bp) protein (600aa)
Acetolactate synthase 3 catalytic subunit {ECO:0000313|EMBL:EGB96709.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EGB96709.1};; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Acetolactate synthase 3 catalytic subunit n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA53_PSEDT
acetolactate synthase 3 catalytic subunit
L3_058_000G1_scaffold_3178_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15748..16239
DNA (492bp) protein (164aa)
ilvH; protein IlvH (EC:2.2.1.6)
Acetolactate synthase, small subunit n=27 Tax=Pseudomonas RepID=A5W953_PSEP1
Acetolactate synthase small subunit {ECO:0000313|EMBL:BAN56510.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
L3_058_000G1_scaffold_3178_18
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16296..17312
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA55_PSEDT
L3_058_000G1_scaffold_3178_19
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17463..18314
DNA (852bp) protein (284aa)
CDP-diacylglycerol-serine O-phosphatidyltransferase n=5 Tax=Pseudomonas RepID=F8G6D1_PSEPU
CDP-diacylglycerol--serine O-phosphatidyltransferase
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KGK27519.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
L3_058_000G1_scaffold_3178_20
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18394..19407
DNA (1014bp) protein (338aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA57_PSEDT
TMAO/DMSO reductase
L3_058_000G1_scaffold_3178_21
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19407..20003
DNA (597bp) protein (199aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EA58_PSEDT
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
sulfite oxidase subunit YedZ
Displaying 21 items

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