ggKbase home page

L3_058_000G1_scaffold_304

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_304_1
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355..1242
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6I7_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97963.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_2
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1432..1713
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6I8_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97964.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_3
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1753..3561)
DNA (1809bp) protein (603aa)
Peptidase M24 n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6I9_PSEDT
Peptidase M24 {ECO:0000313|EMBL:EGB97965.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
peptidase M24
L3_058_000G1_scaffold_304_4
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3748..4860
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6J0_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97966.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_5
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4844..5614
DNA (771bp) protein (257aa)
Prolyl oligopeptidase family protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6J1_PSEDT
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EGB97967.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
prolyl oligopeptidase
L3_058_000G1_scaffold_304_6
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5593..5973)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6J2_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97968.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6064..7047)
DNA (984bp) protein (328aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas putida H8234 RepID=R9VA02_PSEPU
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AGN81597.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
L3_058_000G1_scaffold_304_8
Pseudomonas sp. C5pp, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7130..7684
DNA (555bp) protein (185aa)
isochorismatase n=1 Tax=Pseudomonas putida RepID=UPI0002EFDB16
Isochorismatase {ECO:0000313|EMBL:KIC79363.1}; TaxID=1586081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C5pp.;"
isochorismatase family protein
L3_058_000G1_scaffold_304_9
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7763..8326)
DNA (564bp) protein (188aa)
XRE family transcriptional regulator n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6J4_PSEDT
XRE family transcriptional regulator {ECO:0000313|EMBL:EGB97970.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Cro/Cl family transcriptional regulator
L3_058_000G1_scaffold_304_10
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8411..9361
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6J5_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97971.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
membrane protein
L3_058_000G1_scaffold_304_11
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9511..12426
DNA (2916bp) protein (972aa)
Monovalent cation/H+ antiporter subunit A n=2 Tax=Pseudomonas RepID=L0FJ20_PSEPU
Cation:proton antiporter {ECO:0000313|EMBL:AHC87171.1}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas monteilii SB3101.;"
monovalent cation/H+ antiporter subunit A
L3_058_000G1_scaffold_304_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12426..12770
DNA (345bp) protein (115aa)
Multisubunit potassium/proton antiporter, PhaC subunit n=13 Tax=Pseudomonas RepID=A5W677_PSEP1
monovalent cation/H antiporter subunit C
Monovalent cation/H antiporter subunit C {ECO:0000313|EMBL:AFK67489.1}; TaxID=231023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida ND6.;"
L3_058_000G1_scaffold_304_13
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12767..14446
DNA (1680bp) protein (560aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6J9_PSEDT
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:EGB97958.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
putative monovalent cation/H+ antiporter subunit D
L3_058_000G1_scaffold_304_14
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14443..14931
DNA (489bp) protein (163aa)
Putative monovalent cation/H+ antiporter subunit E n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K0_PSEDT
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:EGB97959.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
cation:proton antiporter
L3_058_000G1_scaffold_304_15
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14928..15206
DNA (279bp) protein (93aa)
Putative monovalent cation/H+ antiporter subunit F n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K1_PSEDT
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:EGB97960.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
monovalent cation/H+ antiporter subunit F
L3_058_000G1_scaffold_304_16
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15203..15568
DNA (366bp) protein (122aa)
Putative monovalent cation/H+ antiporter subunit G n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K2_PSEDT
Putative monovalent cation/H+ antiporter subunit G {ECO:0000313|EMBL:EGB97961.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
putative monovalent cation/H+ antiporter subunit G
L3_058_000G1_scaffold_304_17
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15581..15709)
DNA (129bp) protein (43aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K3_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97962.1}; Flags: Fragment;; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_18
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15790..16260)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas putida (strain W619) RepID=B1JBL4_PSEPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA73933.1}; TaxID=390235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain W619).;"
L3_058_000G1_scaffold_304_19
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16597..16791)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K5_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97947.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_20
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16969..17373)
DNA (405bp) protein (135aa)
Transcriptional regulator, TraR/DksA family n=10 Tax=Pseudomonas RepID=A5W685_PSEP1
TraR/DksA family transcriptional regulator
Conjugal transfer protein TraR {ECO:0000313|EMBL:ERL01368.1}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida LF54.;"
L3_058_000G1_scaffold_304_21
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17655..18428)
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K7_PSEDT
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EGB97949.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
enoyl-CoA hydratase/isomerase
L3_058_000G1_scaffold_304_22
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18442..19569)
DNA (1128bp) protein (376aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K8_PSEDT
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EGB97950.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
acyl-CoA dehydrogenase
L3_058_000G1_scaffold_304_23
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19578..20771)
DNA (1194bp) protein (398aa)
Acetyl-CoA acetyltransferase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6K9_PSEDT
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EGB97951.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
acetyl-CoA acetyltransferase
L3_058_000G1_scaffold_304_24
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20783..21550)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6L0_PSEDT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGB97952.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
short-chain dehydrogenase/reductase SDR
L3_058_000G1_scaffold_304_25
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21565..23211)
DNA (1647bp) protein (549aa)
AMP-dependent synthetase and ligase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6L1_PSEDT
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGB97953.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
AMP-dependent synthetase and ligase
L3_058_000G1_scaffold_304_26
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23369..27862)
DNA (4494bp) protein (1498aa)
Leucine-rich repeat-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6L2_PSEDT
Leucine-rich repeat-containing protein {ECO:0000313|EMBL:EGB97954.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_27
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27961..32460)
DNA (4500bp) protein (1500aa)
Uncharacterized protein n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6V3J3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AIN59390.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
hypothetical protein
L3_058_000G1_scaffold_304_28
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32528..33550)
DNA (1023bp) protein (341aa)
Helix-turn-helix domain-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6L6_PSEDT
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EGB97934.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
AraC family transcriptional regulator
L3_058_000G1_scaffold_304_29
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33643..34707)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6L7_PSEDT
Uncharacterized protein {ECO:0000313|EMBL:EGB97935.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_304_30
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34792..36177
DNA (1386bp) protein (462aa)
Putative protease n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E6L8_PSEDT
Putative protease {ECO:0000313|EMBL:EGB97936.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
peptidase U32 family protein
Displaying items 1-30 of 223 in total

View Taxonomy