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L3_058_000G1_scaffold_455

Search features with annotation key words

Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_455_1
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(160..2757)
DNA (2598bp) protein (866aa)
Putative amidase (EC:3.5.1.4)
Putative amidase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E371_PSEDT
Putative amidase {ECO:0000313|EMBL:EGB99151.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
L3_058_000G1_scaffold_455_2
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2874..3569)
DNA (696bp) protein (232aa)
Branched chain amino acid ABC transporter ATP-binding protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E369_PSEDT
Branched chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGB99149.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
branched chain amino acid ABC transporter ATP-binding protein
L3_058_000G1_scaffold_455_3
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3569..4321)
DNA (753bp) protein (251aa)
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E368_PSEDT
ABC transporter-like protein {ECO:0000313|EMBL:EGB99148.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
ABC transporter-like protein
L3_058_000G1_scaffold_455_4
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4321..5340)
DNA (1020bp) protein (340aa)
Inner-membrane translocator n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E367_PSEDT
Inner-membrane translocator {ECO:0000313|EMBL:EGB99147.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
inner-membrane translocator
L3_058_000G1_scaffold_455_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5342..6202)
DNA (861bp) protein (287aa)
Inner-membrane translocator n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KM99_PSEPG
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABY96575.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
L3_058_000G1_scaffold_455_6
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6268..7470)
DNA (1203bp) protein (401aa)
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E365_PSEDT
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein {ECO:0000313|EMBL:EGB99145.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
branched chain amino acid ABC transporter substrate-binding protein
L3_058_000G1_scaffold_455_7
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7561..8340)
DNA (780bp) protein (260aa)
Regulatory protein GntR, HTH n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E364_PSEDT
Regulatory protein GntR, HTH {ECO:0000313|EMBL:EGB99144.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
regulatory protein GntR
L3_058_000G1_scaffold_455_8
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8509..8820)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=V7DIC4_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN66247.1}; TaxID=160488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain KT2440).;"
L3_058_000G1_scaffold_455_9
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8834..9853)
DNA (1020bp) protein (340aa)
Outer membrane protein assembly factor BamD n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E362_PSEDT
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
DNA uptake lipoprotein-like protein
L3_058_000G1_scaffold_455_10
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9905..10963
DNA (1059bp) protein (353aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1196325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain DOT-T1E).;"
Pseudouridine synthase n=8 Tax=Pseudomonas putida RepID=A5VY71_PSEP1
RluA family pseudouridine synthase
L3_058_000G1_scaffold_455_11
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10960..11700
DNA (741bp) protein (247aa)
Multicopper polyphenol oxidase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E360_PSEDT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
L3_058_000G1_scaffold_455_12
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11873..14437
DNA (2565bp) protein (855aa)
ATP-dependent chaperone ClpB n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E359_PSEDT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
ATPase
L3_058_000G1_scaffold_455_13
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15566..16909)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RAW9_PSEPU
Phage integrase family site specific recombinase {ECO:0000313|EMBL:EKX83691.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
phage integrase family site-specific recombinase
L3_058_000G1_scaffold_455_14
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16906..18789)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RCQ4_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EKX83690.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
relaxase
L3_058_000G1_scaffold_455_15
Pseudomonas sp. W15Feb9B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18896..19684)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RAA9_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:KIK85393.1}; TaxID=550743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. W15Feb9B.;"
hypothetical protein
L3_058_000G1_scaffold_455_16
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19808..20173)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1I8J5_PSEE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK16033.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
L3_058_000G1_scaffold_455_17
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20170..20448)
DNA (279bp) protein (93aa)
Addiction module antidote protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7R9R2_PSEPU
addiction module antidote protein
Addiction module antidote protein {ECO:0000313|EMBL:AIN56987.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_18
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20562..20912
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RAW2_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIN56988.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_19
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20951..22480)
DNA (1530bp) protein (510aa)
Membrane protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RCQ0_PSEPU
Membrane protein {ECO:0000313|EMBL:AIN56989.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
membrane protein
L3_058_000G1_scaffold_455_20
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22477..22833)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RAA5_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIN56990.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_21
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22836..24197)
DNA (1362bp) protein (454aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7R8Y7_PSEPU
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIN56991.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_22
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24218..25153)
DNA (936bp) protein (312aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7R9Q9_PSEPU
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIN56992.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_23
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25153..25572)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RAV7_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIN56993.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_24
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25816..26145)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RCP6_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:ESW41105.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
L3_058_000G1_scaffold_455_25
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26154..26345)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RAA1_PSEPU
Thioredoxin domain-containing protein {ECO:0000313|EMBL:EKX83680.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
DSBA oxidoreductase
L3_058_000G1_scaffold_455_26
unknown

Not on your lists

26650..26913
DNA (264bp) protein (88aa)

This feature has no annotations

L3_058_000G1_scaffold_455_27
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26791..27096)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7R8Y4_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:ESW41069.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
hypothetical protein
L3_058_000G1_scaffold_455_28
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27093..30086)
DNA (2994bp) protein (998aa)
Lipoprotein n=1 Tax=Pseudomonas putida CSV86 RepID=L1LXF4_PSEPU
Lipoprotein {ECO:0000313|EMBL:EKX83678.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
conjugal transfer protein
L3_058_000G1_scaffold_455_29
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30086..30535)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RCP2_PSEPU
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIN56998.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
L3_058_000G1_scaffold_455_30
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30513..32012)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RA96_PSEPU
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIN56999.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ10.;"
Displaying items 1-30 of 160 in total

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