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L3_058_000G1_scaffold_5277

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_5277_1
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..274)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9ISY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22072.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_058_000G1_scaffold_5277_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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984..2174
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037A18C1
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter
L3_058_000G1_scaffold_5277_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2187..2924
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C802_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35296.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_058_000G1_scaffold_5277_4
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2911..3744
DNA (834bp) protein (278aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XVV7_DESHA
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EHL04220.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
Glycosyltransferases involved in cell wall biogenesis
L3_058_000G1_scaffold_5277_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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3741..4742
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13454.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_058_000G1_scaffold_5277_6
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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4762..6780
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F454E
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CDE85805.1}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L3_058_000G1_scaffold_5277_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6812..8005
DNA (1194bp) protein (398aa)
SAM-dependent methyltransferase n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B5CB09
Methyltransferase FkbM family {ECO:0000313|EMBL:CCY66526.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
methyltransferase, FkbM family
L3_058_000G1_scaffold_5277_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8027..8809
DNA (783bp) protein (261aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CBK96789.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CBK96789.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUM0_9FIRM
L3_058_000G1_scaffold_5277_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8767..9876
DNA (1110bp) protein (370aa)
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036713D7
Uncharacterized protein {ECO:0000313|EMBL:CDC93836.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_058_000G1_scaffold_5277_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9878..10801
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F18EC
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN97553.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_058_000G1_scaffold_5277_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10798..11373
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T564_ROSHA
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AEN97552.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_058_000G1_scaffold_5277_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11375..12511
DNA (1137bp) protein (379aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBK96784.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBK96784.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
UDP-galactopyranose mutase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUL5_9FIRM
Displaying 12 items

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