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L3_058_000G1_scaffold_5621

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_5621_1
unknown

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comp(1..114)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_058_000G1_scaffold_5621_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(158..1570)
DNA (1413bp) protein (471aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDP8_9FIRM
L3_058_000G1_scaffold_5621_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1601..2251)
DNA (651bp) protein (217aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUW3_9FIRM
L3_058_000G1_scaffold_5621_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2778..3680)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39506.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_058_000G1_scaffold_5621_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3677..4237)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Oscillibacter RepID=U2QGV9_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ERK62135.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative RNA polymerase sigma factor (ECF subfamily)
L3_058_000G1_scaffold_5621_6
unknown

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4782..5231
DNA (450bp) protein (150aa)

This feature has no annotations

L3_058_000G1_scaffold_5621_7
unknown

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5244..5390
DNA (147bp) protein (49aa)

This feature has no annotations

L3_058_000G1_scaffold_5621_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5453..6097)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GAZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04814.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_058_000G1_scaffold_5621_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6235..7413)
DNA (1179bp) protein (393aa)
Amidohydrolase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTG4_9CLOT
Amidohydrolase {ECO:0000313|EMBL:EOQ35541.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
amidohydrolase
L3_058_000G1_scaffold_5621_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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7613..8983
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUW0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM41522.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MATE efflux family protein
L3_058_000G1_scaffold_5621_11
unknown

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9155..9334
DNA (180bp) protein (60aa)

This feature has no annotations

L3_058_000G1_scaffold_5621_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9359..10027
DNA (669bp) protein (223aa)
Putative transcriptional regulatory protein CseB n=2 Tax=Oscillibacter RepID=U2QX29_9FIRM
Putative transcriptional regulatory protein CseB {ECO:0000313|EMBL:ERK63282.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
DNA-binding response regulator
L3_058_000G1_scaffold_5621_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10005..11495
DNA (1491bp) protein (497aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QD40_9FIRM
histidine kinase
L3_058_000G1_scaffold_5621_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11678..11932
DNA (255bp) protein (85aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QK60_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK63285.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC transporter ATP-binding protein
Displaying 14 items

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