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L3_058_000G1_scaffold_3892

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_3892_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..199
DNA (198bp) protein (66aa)
Nitroreductase (EC:1.-.-.-)
Nitroreductase family protein n=3 Tax=Clostridiales RepID=G9YLK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31875.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_058_000G1_scaffold_3892_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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306..815
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53972.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ECF subfamily RNA polymerase sigma factor
L3_058_000G1_scaffold_3892_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

861..1781
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YLJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31877.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_058_000G1_scaffold_3892_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1799..2236
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54740.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_058_000G1_scaffold_3892_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2614..3909)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54738.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_058_000G1_scaffold_3892_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4360..4626
DNA (267bp) protein (89aa)
Helicase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8R1_9CLOT
Helicase protein {ECO:0000313|EMBL:ERI80413.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DNA methylase
L3_058_000G1_scaffold_3892_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4647..4913)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DG22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80412.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_058_000G1_scaffold_3892_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4982..6052
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DL41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80411.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_058_000G1_scaffold_3892_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6055..6393
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C7B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80410.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Bacterial mobilisation protein (MobC).
L3_058_000G1_scaffold_3892_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6500..6790
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BQI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31753.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_058_000G1_scaffold_3892_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6866..8299
DNA (1434bp) protein (478aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8Q5_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:ERI80408.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Relaxase/Mobilisation nuclease domain.
L3_058_000G1_scaffold_3892_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8771..9550)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DL37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI80406.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_058_000G1_scaffold_3892_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9881..10333)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66454.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_058_000G1_scaffold_3892_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10337..11212)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78889.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_058_000G1_scaffold_3892_15

Not on your lists

comp(11429..11962)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BJB4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD68843.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RNA polymerase sigma factor SigZ
L3_058_000G1_scaffold_3892_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12568..13050
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=2 Tax=Clostridiales RepID=U2AIX1_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:ERI65794.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
sigma-70 family RNA polymerase sigma factor
L3_058_000G1_scaffold_3892_17
unknown

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13090..13332
DNA (243bp) protein (81aa)

This feature has no annotations

L3_058_000G1_scaffold_3892_18
unknown

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13584..14732
DNA (1149bp) protein (383aa)

This feature has no annotations

L3_058_000G1_scaffold_3892_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14922..16394
DNA (1473bp) protein (491aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C782_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35669.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dolichyl-phosphate-mannose-mannosyltransferase family protein
L3_058_000G1_scaffold_3892_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16411..16881
DNA (471bp) protein (157aa)
Putative bactoprenol glucosyl transferase-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AX99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54550.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glycosyl transferase GT2 family protein
Displaying 20 items

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