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L3_058_000G1_scaffold_3989

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_3989_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(136..756)
DNA (621bp) protein (207aa)
NADPH-dependent FMN reductase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X8D2_9CLOT
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ENY92148.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
multimeric flavodoxin WrbA family protein
L3_058_000G1_scaffold_3989_2
unknown

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926..1237
DNA (312bp) protein (104aa)

This feature has no annotations

L3_058_000G1_scaffold_3989_3
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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1413..1622
DNA (210bp) protein (70aa)
Cold shock-like protein CspG id=3970284 bin=GWF2_Clostridiales_36_10 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
cold-shock DNA-binding domain-containing protein
Tax=GWF2_Clostridiales_36_10_curated
L3_058_000G1_scaffold_3989_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1681..1959
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75176.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_058_000G1_scaffold_3989_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2107..2292
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X993_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48062.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_3989_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2578..4323
DNA (1746bp) protein (582aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C6E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52782.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L3_058_000G1_scaffold_3989_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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4307..6130
DNA (1824bp) protein (608aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R3L6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ35760.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000G1_scaffold_3989_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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6305..7159
DNA (855bp) protein (285aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
bacA; pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB10_9FIRM
L3_058_000G1_scaffold_3989_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7277..7756)
DNA (480bp) protein (160aa)
Toxin secretion/phage lysis holin n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C911_9FIRM
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EHM51691.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative holin
L3_058_000G1_scaffold_3989_10
unknown

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comp(7982..8215)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_058_000G1_scaffold_3989_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8461..10266
DNA (1806bp) protein (602aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE8_9FIRM
Oligoendopeptidase F {ECO:0000313|EMBL:EGJ47326.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_3989_12
unknown

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comp(10818..11135)
DNA (318bp) protein (106aa)

This feature has no annotations

L3_058_000G1_scaffold_3989_13
unknown

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comp(11199..11294)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_058_000G1_scaffold_3989_14
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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11459..12217
DNA (759bp) protein (253aa)
Nicotinamidase-like amidase n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FM92_9ACTN
Nicotinamidase-like amidase {ECO:0000313|EMBL:CCY05978.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
nicotinamidase-like amidase
L3_058_000G1_scaffold_3989_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12448..13086
DNA (639bp) protein (213aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9Z265_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38520.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
iron-sulfur flavoprotein
L3_058_000G1_scaffold_3989_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13465..14241
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000377155F
PF06738 family protein {ECO:0000313|EMBL:EJF38175.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_058_000G1_scaffold_3989_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14238..14711
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037F9BC7
PF12821 family protein {ECO:0000313|EMBL:EJF38248.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_058_000G1_scaffold_3989_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14793..16184)
DNA (1392bp) protein (464aa)
RNA polymerase sigma-54 factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEM0_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EHO32960.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase sigma-54 factor
Displaying 18 items

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