ggKbase home page

L3_058_000G1_scaffold_1386

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_1386_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..979)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YSU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56693.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ribonuclease J
L3_058_000G1_scaffold_1386_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1445..1663
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01496.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Protein of unknown function (DUF1653).
L3_058_000G1_scaffold_1386_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1668..2000
DNA (333bp) protein (111aa)
ArsC family protein n=2 Tax=Clostridiales RepID=U2D5M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56726.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Arsenate reductase and related proteins, glutaredoxin family
L3_058_000G1_scaffold_1386_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2325..3323)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01380.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1386_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3706..4794
DNA (1089bp) protein (363aa)
O-succinylbenzoic acid (OSB) synthetase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYM6_9FIRM
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:KJF41403.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
mandelate racemase/muconate lactonizing protein
L3_058_000G1_scaffold_1386_6
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

4911..6878
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CG46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66658.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
peptide ABC transporter substrate-binding protein
L3_058_000G1_scaffold_1386_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

7032..7982
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92265.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
binding-protein-dependent transport system inner membrane protein
L3_058_000G1_scaffold_1386_8
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

7982..8977
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ELI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92264.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ABC transporter permease
L3_058_000G1_scaffold_1386_9
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

8991..10034
DNA (1044bp) protein (348aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIJ6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX92263.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_058_000G1_scaffold_1386_10
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

10027..10959
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EW17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92261.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_058_000G1_scaffold_1386_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

11059..11976
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92260.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
peptidase S66
L3_058_000G1_scaffold_1386_12
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

11996..12787
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92258.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
beta-lactamase
L3_058_000G1_scaffold_1386_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12816..13634
DNA (819bp) protein (273aa)
Dipeptidyl-peptidase 6 {ECO:0000313|EMBL:EDN01378.1}; EC=3.4.22.- {ECO:0000313|EMBL:EDN01378.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Dipeptidyl-peptidase 6 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQN2_9FIRM
NLP/P60 protein
L3_058_000G1_scaffold_1386_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13770..14660)
DNA (891bp) protein (297aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA84_9FIRM
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EGJ47262.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_1386_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14874..15827)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01394.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1386_16
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(15827..16633)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ELH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92254.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
amino acid amidase
L3_058_000G1_scaffold_1386_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16921..17841)
DNA (921bp) protein (307aa)
CAAX amino terminal protease family protein n=2 Tax=Clostridiales RepID=G9YQH3_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EHM51352.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
CAAX amino terminal protease family.
L3_058_000G1_scaffold_1386_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18039..18689
DNA (651bp) protein (217aa)
Transcriptional regulator, MerR family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRQ5_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDN01315.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative MerR family transcriptional regulator
L3_058_000G1_scaffold_1386_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18670..18990
DNA (321bp) protein (107aa)
UPF0145 protein HMPREF0372_02378 n=2 Tax=Clostridiales RepID=G9YS72_9FIRM
UPF0145 protein HMPREF0995_01210 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1386_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19096..20025
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01310.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1386_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20127..22040
DNA (1914bp) protein (638aa)
Peptidase, S41 family n=2 Tax=Clostridiales RepID=G9YS70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53768.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
carboxyl-terminal protease
L3_058_000G1_scaffold_1386_22
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22205..22363)
DNA (159bp) protein (53aa)
rubredoxin n=1 Tax=Lachnobacterium bovis RepID=UPI0003B6FD48
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
rubredoxin
L3_058_000G1_scaffold_1386_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22389..23573)
DNA (1185bp) protein (395aa)
fprA2; Flavo-diiron protein FprA2 (EC:1.6.3.-)
Metallo-beta-lactamase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPE6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDN02028.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_058_000G1_scaffold_1386_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23876..25009
DNA (1134bp) protein (378aa)
Putative cysteine desulfurase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTC4_9FIRM
Putative cysteine desulfurase {ECO:0000313|EMBL:EHM44155.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
iscS; cysteine desulfurase
L3_058_000G1_scaffold_1386_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25094..26476
DNA (1383bp) protein (461aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=H1CII1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHO29216.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
MatE efflux family protein
L3_058_000G1_scaffold_1386_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26511..27281
DNA (771bp) protein (257aa)
Metallo-beta-lactamase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX48_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDM99396.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Metal-dependent hydrolases of the beta-lactamase superfamily II
L3_058_000G1_scaffold_1386_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27457..28515
DNA (1059bp) protein (353aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Clostridiales RepID=H1CIH9_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hrcA; heat-inducible transcription repressor HrcA
L3_058_000G1_scaffold_1386_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28531..29088
DNA (558bp) protein (186aa)
Protein GrpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEG4_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
grpE; GrpE protein
L3_058_000G1_scaffold_1386_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29211..31070
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=2 Tax=Clostridiales RepID=H1CIH7_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
dnaK; chaperone protein DnaK
L3_058_000G1_scaffold_1386_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31286..32455
DNA (1170bp) protein (390aa)
Chaperone protein DnaJ n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX43_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dnaJ; chaperone protein DnaJ
Displaying items 1-30 of 36 in total

View Taxonomy