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L3_058_000G1_scaffold_1631

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_1631_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(137..601)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67125.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
GCN5-like N-acetyltransferase
L3_058_000G1_scaffold_1631_2
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(598..1821)
DNA (1224bp) protein (408aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003752632
anhydro-N-acetylmuramic acid kinase
L3_058_000G1_scaffold_1631_3
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1821..2744)
DNA (924bp) protein (308aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1226755 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-269.;"
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Cohnella laeviribosi RepID=UPI000368C221
murQ; N-acetylmuramic acid-6-phosphate etherase
L3_058_000G1_scaffold_1631_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3015..3758
DNA (744bp) protein (248aa)
SIS domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM25_9CLOT
SIS domain protein {ECO:0000313|EMBL:EKY28622.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RpiR family phosphosugar-binding transcriptional regulator
L3_058_000G1_scaffold_1631_5
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

3810..4847
DNA (1038bp) protein (346aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Fretibacterium fastidiosum RepID=D4M7I4_9BACT
Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CBL27829.1}; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
L3_058_000G1_scaffold_1631_6
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4909..6516
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037EAACB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGP74641.1}; TaxID=1385514 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
family 5 extracellular solute-binding protein
L3_058_000G1_scaffold_1631_7
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6669..7613
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R136_SPISS
Glutathione ABC transporter permease {ECO:0000313|EMBL:KGP74642.1}; TaxID=1385514 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
binding-protein-dependent transporters inner membrane component
L3_058_000G1_scaffold_1631_8
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7630..8466
DNA (837bp) protein (279aa)
glutathione ABC transporter permease GsiD n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000381BCA2
Glutathione ABC transporter permease {ECO:0000313|EMBL:KGP74643.1}; TaxID=1385514 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
binding-protein-dependent transporters inner membrane component
L3_058_000G1_scaffold_1631_9
Pontibacillus yanchengensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8483..9496
DNA (1014bp) protein (338aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037E5342
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGP74644.1}; TaxID=1385514 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus yanchengensis Y32.;"
oligopeptide/dipeptide ABC transporter ATPase
L3_058_000G1_scaffold_1631_10
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9493..10470
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035FAE3A
Strain NCTC 7096 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIV56650.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
ABC transporter ATP-binding protein
L3_058_000G1_scaffold_1631_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10547..11098)
DNA (552bp) protein (184aa)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVR8_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDM99811.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
L3_058_000G1_scaffold_1631_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11105..11806)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99812.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1631_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11986..12852
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99816.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1631_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12888..13733
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNB6_9FIRM
putative cobalt ABC transporter ATP-binding protein
L3_058_000G1_scaffold_1631_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13812..14678
DNA (867bp) protein (289aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7V7_9FIRM
putative cobalt ABC transporter ATP-binding protein
L3_058_000G1_scaffold_1631_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14680..15486
DNA (807bp) protein (269aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVS6_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative cobalt ABC transporter permease protein
L3_058_000G1_scaffold_1631_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15550..16320
DNA (771bp) protein (257aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
truA; tRNA pseudouridine synthase TruA (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNC0_9FIRM
L3_058_000G1_scaffold_1631_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16340..17530
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53528.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_058_000G1_scaffold_1631_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17544..18236
DNA (693bp) protein (231aa)
Putative CvpA family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVS9_9FIRM
Putative CvpA family protein {ECO:0000313|EMBL:EDM99822.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1631_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18269..18805
DNA (537bp) protein (179aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EDM99823.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EDM99823.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVT0_9FIRM
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
L3_058_000G1_scaffold_1631_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18946..21489
DNA (2544bp) protein (848aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55899.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ClpB protein
L3_058_000G1_scaffold_1631_22
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21730..23013
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ37827.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
iron-sulfur cluster-binding protein
L3_058_000G1_scaffold_1631_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23171..23686)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00374.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1631_24
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24114..24740
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRV3_OSCVS
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_058_000G1_scaffold_1631_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25127..26152
DNA (1026bp) protein (342aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Clostridiales RepID=G9YNC6_9FIRM
L3_058_000G1_scaffold_1631_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26233..28917
DNA (2685bp) protein (895aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pheT; phenylalanyl-tRNA synthetase beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDD9_9FIRM
L3_058_000G1_scaffold_1631_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29045..29293
DNA (249bp) protein (83aa)
UPF0297 protein BACCAP_04192 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P125_9FIRM
UPF0297 protein BACCAP_04192 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_1631_28
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29414..29932
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AGU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42023.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Nitroreductase
L3_058_000G1_scaffold_1631_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30055..31284
DNA (1230bp) protein (410aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=2 Tax=Clostridiales RepID=H1CL88_9FIRM
L3_058_000G1_scaffold_1631_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31323..32207)
DNA (885bp) protein (295aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C230_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:ERI61456.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
radical SAM domain-containing protein
Displaying items 1-30 of 33 in total

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