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L3_058_000G1_scaffold_932

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_932_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(124..1434)
DNA (1311bp) protein (437aa)
4Fe-4S binding domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPP6_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EHM52490.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_058_000G1_scaffold_932_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1466..1888)
DNA (423bp) protein (141aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Clostridiales RepID=G9YPP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55043.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_058_000G1_scaffold_932_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1894..2235)
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2A910_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22648.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DRTGG domain-containing protein
L3_058_000G1_scaffold_932_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2461..3648)
DNA (1188bp) protein (396aa)
putative RNA helicase (EC:3.6.1.-)
DEAD-box ATP-dependent RNA helicase CshA family protein n=2 Tax=Clostridiales RepID=U2CNP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31840.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_058_000G1_scaffold_932_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3946..5022
DNA (1077bp) protein (359aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFC7_9FIRM
6-phosphofructokinase {ECO:0000313|EMBL:EGJ46147.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5084..6811)
DNA (1728bp) protein (576aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Putative phosphoglucomutase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUD4_9FIRM
Putative phosphoglucomutase {ECO:0000313|EMBL:EHM42403.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_058_000G1_scaffold_932_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6927..7409)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFB8_9FIRM
hypothetical protein
L3_058_000G1_scaffold_932_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7440..8228)
DNA (789bp) protein (263aa)
Metallo-beta-lactamase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ35_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDN01960.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
beta-lactamase domain protein
L3_058_000G1_scaffold_932_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8367..9662)
DNA (1296bp) protein (432aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFG0_9FIRM
L3_058_000G1_scaffold_932_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10059..10256
DNA (198bp) protein (66aa)
Small, acid-soluble spore protein C2 n=2 Tax=Clostridiales RepID=G9YV35_9FIRM
Small, acid-soluble spore protein C2 {ECO:0000313|EMBL:EHM41081.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Small, acid-soluble spore proteins, alpha/beta type.
L3_058_000G1_scaffold_932_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10322..11599)
DNA (1278bp) protein (426aa)
GTPase Obg n=3 Tax=Clostridiales RepID=G9YR25_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
obg; GTP-binding protein Obg
L3_058_000G1_scaffold_932_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11749..12033)
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAA7_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
50S ribosomal protein L27
L3_058_000G1_scaffold_932_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12082..12387)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50524.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_058_000G1_scaffold_932_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12417..12728)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M9F1_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
rplU; 50S ribosomal protein L21
L3_058_000G1_scaffold_932_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12959..13219
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46626.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_16

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13425..14270
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BW64_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB76059.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
hypothetical protein
L3_058_000G1_scaffold_932_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14281..14667
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46624.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14655..15386
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46623.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L3_058_000G1_scaffold_932_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15383..15562
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46622.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15559..16263
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46621.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein predicted by Glimmer/Critica
L3_058_000G1_scaffold_932_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16256..16966
DNA (711bp) protein (237aa)
dnaQ; putative DNA polymerase III epsilon subunit (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS4_9FIRM
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EGJ46620.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16971..17234
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46619.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17247..17927
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46618.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_058_000G1_scaffold_932_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17924..18073
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46617.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_932_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18063..18695
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46616.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_058_000G1_scaffold_932_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18708..19499
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46615.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ERF superfamily.
L3_058_000G1_scaffold_932_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19499..19921
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR8_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ssb; single-stranded DNA-binding protein
L3_058_000G1_scaffold_932_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19996..20847
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46613.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_058_000G1_scaffold_932_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21020..21727
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46612.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA replication protein
L3_058_000G1_scaffold_932_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21738..22268
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46611.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying items 1-30 of 68 in total

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