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L3_058_000G1_scaffold_2395_21

Organism: dasL3_058_000G1_concoct_79_sub_fa

near complete RP 43 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 13 / 38
Location: 20697..20948

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSZ8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 71.0
  • Bit_score: 114
  • Evalue 3.80e-23
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 71.0
  • Bit_score: 114
  • Evalue 5.40e-23
hfq; Hfq protein similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 98
  • Evalue 8.00e-19

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Taxonomy

Pseudoflavonifractor capillosus → Pseudoflavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 252
ATGCAAAAGACCAACAATCTTCAGGAACTGTTTCTGCTCCGGGCCCGGAGCACCCGCGCCAATGTGACGGTATTCCTCATGAACGGCTATCAGATCCGGGGACAGATCACCGGGTTTGACGCCTTTGTGGTGGTGGTCCACAGCGAGGGCAAGCAGCAGATCATCTATAAACACGCCATTTCCACCATTATCCCGGAACGTCCGGTGGATCTGCGCCCCACGCCCTTCCCCACGGAGGAGCCGGAGGGGTAA
PROTEIN sequence
Length: 84
MQKTNNLQELFLLRARSTRANVTVFLMNGYQIRGQITGFDAFVVVVHSEGKQQIIYKHAISTIIPERPVDLRPTPFPTEEPEG*