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L3_058_000G1_scaffold_2395

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_2395_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(129..1214)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01424.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
peptidase S8/S53 subtilisin kexin sedolisin
L3_058_000G1_scaffold_2395_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1353..1640
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01506.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted membrane protein
L3_058_000G1_scaffold_2395_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1698..2636)
DNA (939bp) protein (313aa)
Transporter, auxin efflux carrier (AEC) family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT79_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDN00642.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Predicted permeases
L3_058_000G1_scaffold_2395_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2793..4559
DNA (1767bp) protein (589aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPJ4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM52590.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative ABC transporter permease/ATP-binding protein
L3_058_000G1_scaffold_2395_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4656..5279)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W6Z0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98649.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_058_000G1_scaffold_2395_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5434..6258
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000371577C
Uncharacterized protein {ECO:0000313|EMBL:EFW04712.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
MerR family transcriptional regulator
L3_058_000G1_scaffold_2395_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6316..6876
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01803.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
sporulation protein YtaF
L3_058_000G1_scaffold_2395_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7123..7947)
DNA (825bp) protein (275aa)
Nucleotide-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXB5_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:EHM37759.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative Mrp family protein
L3_058_000G1_scaffold_2395_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7992..8939)
DNA (948bp) protein (316aa)
Phosphoribulokinase/uridine kinase family protein n=2 Tax=Clostridiales RepID=G9YXB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57380.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative phosphotransferase
L3_058_000G1_scaffold_2395_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8961..10457)
DNA (1497bp) protein (499aa)
hemZ; coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSY8_9FIRM
Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:EDN00551.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_058_000G1_scaffold_2395_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10496..11107)
DNA (612bp) protein (204aa)
Metallo-beta-lactamase domain protein n=2 Tax=Clostridiales RepID=G9YXB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35157.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_058_000G1_scaffold_2395_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11134..11577)
DNA (444bp) protein (148aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSZ0_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
L3_058_000G1_scaffold_2395_13
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11608..12675)
DNA (1068bp) protein (356aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSZ1_9FIRM
L3_058_000G1_scaffold_2395_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12867..14270
DNA (1404bp) protein (468aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8F2_9FIRM
miaB; isopentenyl-adenosine A37 tRNA methylthiolase
L3_058_000G1_scaffold_2395_15
unknown

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comp(14250..14516)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_058_000G1_scaffold_2395_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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14608..14817
DNA (210bp) protein (70aa)
Putative Xre family DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMN7_9FIRM
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CCZ46217.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
XRE family transcriptional regulator
L3_058_000G1_scaffold_2395_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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14852..15061
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XXC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14329.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Transcriptional regulator, Cro/CI family
L3_058_000G1_scaffold_2395_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15211..17808
DNA (2598bp) protein (866aa)
DNA mismatch repair protein MutS n=2 Tax=Clostridiales RepID=G9YVJ8_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
mutS; DNA mismatch repair protein MutS
L3_058_000G1_scaffold_2395_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17847..18545
DNA (699bp) protein (233aa)
CAAX amino terminal protease family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57370.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_058_000G1_scaffold_2395_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18591..20567
DNA (1977bp) protein (659aa)
DNA mismatch repair protein MutL n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSZ6_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
mutL; DNA mismatch repair protein MutL
L3_058_000G1_scaffold_2395_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20697..20948
DNA (252bp) protein (84aa)
RNA-binding protein Hfq n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSZ8_9FIRM
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hfq; Hfq protein
L3_058_000G1_scaffold_2395_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20993..22285
DNA (1293bp) protein (431aa)
Putative membrane fusion protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57452.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_058_000G1_scaffold_2395_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22321..23031
DNA (711bp) protein (237aa)
Pyridoxal phosphate enzyme, YggS family n=3 Tax=Clostridiales RepID=G9YVJ1_9FIRM
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EHM40321.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_058_000G1_scaffold_2395_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23115..23588
DNA (474bp) protein (158aa)
Cell division protein SepF n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT01_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
sepF; cell division protein SepF
L3_058_000G1_scaffold_2395_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23661..24425
DNA (765bp) protein (255aa)
DivIVA domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGI8_9CLOT
DivIVA domain protein {ECO:0000313|EMBL:ERI64939.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative cell division protein
L3_058_000G1_scaffold_2395_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24816..25823
DNA (1008bp) protein (336aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AZT5_9CLOT
isoleucyl-tRNA synthetase
Displaying 26 items

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