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L3_058_000G1_scaffold_3438

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_3438_1
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4..1056)
DNA (1053bp) protein (351aa)
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
tRNA pseudouridine synthase D n=1 Tax=Proteus hauseri ZMd44 RepID=V6MHN2_PROHU
truD; tRNA pseudouridine synthase D
L3_058_000G1_scaffold_3438_2
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1053..1538)
DNA (486bp) protein (162aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MIH2_PROHU
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_058_000G1_scaffold_3438_3
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1543..2289)
DNA (747bp) protein (249aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MR86_PROHU
L3_058_000G1_scaffold_3438_4
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2329..2649)
DNA (321bp) protein (107aa)
Cell division protein FtsB n=2 Tax=Proteus RepID=C0AXD5_9ENTR
Cell division protein FtsB {ECO:0000256|HAMAP-Rule:MF_00599, ECO:0000256|SAAS:SAAS00014481}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
ftsB; cell division protein FtsB
L3_058_000G1_scaffold_3438_5
Proteus vulgaris, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2951..3562)
DNA (612bp) protein (204aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus vulgaris.;"
cysC; adenylylsulfate kinase (EC:2.7.1.25)
adenylylsulfate kinase n=1 Tax=Proteus mirabilis RepID=UPI0002DB17CB
L3_058_000G1_scaffold_3438_6
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3565..5019)
DNA (1455bp) protein (485aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Proteus hauseri ZMd44 RepID=V6MJ82_PROHU
cysN; sulfate adenylyltransferase subunit 1
L3_058_000G1_scaffold_3438_7
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5032..5940)
DNA (909bp) protein (303aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Proteus hauseri ZMd44 RepID=V6MHP8_PROHU
cysD; sulfate adenylyltransferase subunit 2
L3_058_000G1_scaffold_3438_8
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5953..7377)
DNA (1425bp) protein (475aa)
cysG; bifunctional uroporphyrin-III C-methyltransferase/sirohydrochlorin ferrochelatase (EC:2.1.1.107 4.99.1.4)
Bifunctional uroporphyrin-III C-methyltransferase/sirohydrochlorin ferrochelatase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MII7_PROHU
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
L3_058_000G1_scaffold_3438_9
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7584..8315)
DNA (732bp) protein (244aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00055482}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000256|SAAS:SAAS00089161};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
cysH; phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MR99_PROHU
L3_058_000G1_scaffold_3438_10
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8312..10042)
DNA (1731bp) protein (577aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
cysI; sulfite reductase subunit beta (EC:1.8.1.2)
Sulfite reductase subunit beta n=1 Tax=Proteus hauseri ZMd44 RepID=V6MHR9_PROHU
L3_058_000G1_scaffold_3438_11
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10043..11854)
DNA (1812bp) protein (604aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|HAMAP-Rule:MF_01541, ECO:0000256|PIRNR:PIRNR000207}; Short=SiR-FP {ECO:0000256|HAMAP-Rule:MF_01541, ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01541, ECO:0000256|PIRNR:PIRNR000207};; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Proteus hauseri ZMd44 RepID=V6MJ94_PROHU
cysJ; sulfite reductase [NADPH] flavoprotein alpha-component
L3_058_000G1_scaffold_3438_12
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12155..12517
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12)
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MHR8_PROHU
L3_058_000G1_scaffold_3438_13
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12596..13267)
DNA (672bp) protein (224aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
Uncharacterized protein n=1 Tax=Proteus hauseri ZMd44 RepID=V6MIK7_PROHU
hypothetical protein
L3_058_000G1_scaffold_3438_14
Proteus vulgaris, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13434..14801
DNA (1368bp) protein (456aa)
Proline-specific permease n=1 Tax=Proteus hauseri ZMd44 RepID=V6MRB7_PROHU
Amino acid permease family protein {ECO:0000313|EMBL:KGA55664.1}; TaxID=585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus vulgaris.;"
proY; proline-specific permease
L3_058_000G1_scaffold_3438_15
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14883..16064)
DNA (1182bp) protein (394aa)
Methionine gamma-lyase {ECO:0000313|EMBL:EST58034.1}; EC=4.4.1.11 {ECO:0000313|EMBL:EST58034.1};; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
mdeA; methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MHT9_PROHU
L3_058_000G1_scaffold_3438_16
Proteus vulgaris, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16084..16482)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0AXF5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KGA55667.1}; TaxID=585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus vulgaris.;"
hypothetical protein
L3_058_000G1_scaffold_3438_17
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16493..17686)
DNA (1194bp) protein (398aa)
Oxidoreductase n=1 Tax=Proteus hauseri ZMd44 RepID=V6MJB1_PROHU
Oxidoreductase {ECO:0000313|EMBL:EST58035.1}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
oxidoreductase
L3_058_000G1_scaffold_3438_18
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17854..18639)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Proteus hauseri ZMd44 RepID=V6MHS2_PROHU
Uncharacterized protein {ECO:0000313|EMBL:EST58036.1}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
hypothetical protein
L3_058_000G1_scaffold_3438_19
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18829..18966
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QZ31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR10214.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
S-layer protein
Displaying 19 items

View Taxonomy