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L3_058_000G1_scaffold_3533

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_3533_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(161..1258)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HBB3_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
GTP-binding protein YchF
L3_058_000G1_scaffold_3533_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(1417..1968)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23286.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_058_000G1_scaffold_3533_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(2146..3021)
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GXP9_9FIRM
L3_058_000G1_scaffold_3533_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(3025..5139)
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H271_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22174.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
serine/threonine protein kinase, bacterial
L3_058_000G1_scaffold_3533_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(5136..5879)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GY65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22173.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Ser/Thr protein phosphatase
L3_058_000G1_scaffold_3533_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(6065..7102)
DNA (1038bp) protein (346aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HBA9_9FIRM
L3_058_000G1_scaffold_3533_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(7095..8456)
DNA (1362bp) protein (454aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
sun; rRNA small subunit methyltransferase B Sun (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HBQ2_9FIRM
L3_058_000G1_scaffold_3533_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(8460..9173)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GXP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY22170.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Predicted Zn-dependent protease
L3_058_000G1_scaffold_3533_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(9170..10099)
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H267_9FIRM
L3_058_000G1_scaffold_3533_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(10096..10599)
DNA (504bp) protein (168aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GY61_9FIRM
L3_058_000G1_scaffold_3533_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(10686..12989)
DNA (2304bp) protein (768aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HBA8_9FIRM
priA; primosomal protein N' PriA
L3_058_000G1_scaffold_3533_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(12986..14464)
DNA (1479bp) protein (493aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HBP8_9FIRM
L3_058_000G1_scaffold_3533_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(14557..15024)
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GXP4_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
SsrA-binding protein
L3_058_000G1_scaffold_3533_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(14990..16990)
DNA (2001bp) protein (667aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Ribonuclease R n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H262_9FIRM
ribonuclease R
L3_058_000G1_scaffold_3533_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(17065..17310)
DNA (246bp) protein (82aa)
Preprotein translocase SecG subunit n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GY56_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CCY22163.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
preprotein translocase subunit SecG
L3_058_000G1_scaffold_3533_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

17669..18022
DNA (354bp) protein (118aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZ90_9FIRM
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CCY22528.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_058_000G1_scaffold_3533_17

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comp(18121..18465)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1TF91_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC57916.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying 17 items

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