ggKbase home page

L3_058_000G1_scaffold_1654

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_1654_1
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(196..1632)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H143_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23198.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
arylsulfatase
L3_058_000G1_scaffold_1654_2
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

1911..2891
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23196.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
binding-protein-dependent transport system inner membrane protein
L3_058_000G1_scaffold_1654_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

2904..3854
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23195.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
binding-protein-dependent transport systems inner membrane component
L3_058_000G1_scaffold_1654_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

3974..5476
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H562_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23194.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
extracellular solute-binding protein
L3_058_000G1_scaffold_1654_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

5716..7500
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H140_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23193.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
histidine kinase internal region
L3_058_000G1_scaffold_1654_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

7475..8230
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23192.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
two component AraC family transcriptional regulator
L3_058_000G1_scaffold_1654_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

8246..9718
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23191.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
sulfatase
L3_058_000G1_scaffold_1654_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

9702..12068
DNA (2367bp) protein (789aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23190.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_058_000G1_scaffold_1654_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12059..13915
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38715.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycoside hydrolase family protein
L3_058_000G1_scaffold_1654_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

14006..16543
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H135_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23188.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
beta-mannosidase
L3_058_000G1_scaffold_1654_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

16650..18512
DNA (1863bp) protein (621aa)
Probable ABC transporter protein ATP-binding component n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE85_9FIRM
Probable ABC transporter protein ATP-binding component {ECO:0000313|EMBL:CCY23187.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ABC transporter
L3_058_000G1_scaffold_1654_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

18547..18951
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23186.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_058_000G1_scaffold_1654_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(18967..19725)
DNA (759bp) protein (253aa)
fabG2; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23185.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_058_000G1_scaffold_1654_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(19741..20508)
DNA (768bp) protein (256aa)
GCN5-related N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R8L4_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCZ35089.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
N-acetyltransferase GCN5
L3_058_000G1_scaffold_1654_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20590..20910)
DNA (321bp) protein (107aa)
TfoX N-terminal domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMW0_9CLOT
TfoX N-terminal domain protein {ECO:0000313|EMBL:EEA82699.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
TfoX domain-containing protein
L3_058_000G1_scaffold_1654_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21588..22505
DNA (918bp) protein (306aa)
Putative thioredoxin-disulfide reductase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BH53_9CLOT
Putative thioredoxin-disulfide reductase {ECO:0000313|EMBL:ERI71183.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
thioredoxin reductase
L3_058_000G1_scaffold_1654_17
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

22763..24112
DNA (1350bp) protein (450aa)
NLPC/P60 domain-containing protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N1N8_9FIRM
NLPC/P60 domain-containing protein {ECO:0000313|EMBL:CDF06720.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
NLPC/P60 domain-containing protein
L3_058_000G1_scaffold_1654_18
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

24771..25298
DNA (528bp) protein (176aa)
Ribosomal subunit interface protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H540_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCY23174.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
SSU ribosomal protein S30P/sigma 54 modulation protein
L3_058_000G1_scaffold_1654_19
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25367..25759)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32040.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1654_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(25789..27450)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R6N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34429.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC transporter-like protein
L3_058_000G1_scaffold_1654_21
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27410..29173)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EMI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97986.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
ABC transporter
L3_058_000G1_scaffold_1654_22
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

29594..31093
DNA (1500bp) protein (500aa)
Alginate O-acetylation protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEK0_9FIRM
Alginate O-acetylation protein {ECO:0000313|EMBL:CCY23171.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
algI; alginate O-acetylation protein
L3_058_000G1_scaffold_1654_23
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

31105..32106
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H0I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23170.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_058_000G1_scaffold_1654_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32134..33279
DNA (1146bp) protein (382aa)
Peptidase, M23 family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AYY5_9CLOT
Peptidase, M23 family {ECO:0000313|EMBL:ERI65260.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
peptidase M23
L3_058_000G1_scaffold_1654_25
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33372..34325
DNA (954bp) protein (318aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit (EC:6.3.5.2)
GMP synthase (Glutamine-hydrolyzing) domain-containing protein n=1 Tax=Dorea sp. 5-2 RepID=R9NA11_9FIRM
L3_058_000G1_scaffold_1654_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34510..34935)
DNA (426bp) protein (142aa)
XRE family transcriptional regulator n=4 Tax=Clostridium bolteae RepID=R0AN57_9CLOT
XRE family transcriptional regulator {ECO:0000313|EMBL:ENZ47367.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Helix-turn-helix.
Displaying 26 items

View Taxonomy