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L3_058_000M1_scaffold_1923

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_1923_1
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..114
DNA (114bp) protein (38aa)
Tetratricopeptide repeat family protein n=2 Tax=Bacteroides vulgatus RepID=A6L0T7_BACV8
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EFV65226.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_058_000M1_scaffold_1923_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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300..548
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9IHS0_BACVU
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY72864.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_058_000M1_scaffold_1923_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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541..1023
DNA (483bp) protein (161aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroides vulgatus RepID=D4V3Z7_BACVU
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOR97606.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_058_000M1_scaffold_1923_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1038..1928
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L0T9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39303.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_1923_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1925..2290
DNA (366bp) protein (122aa)
Transcriptional regulator, GntR family n=2 Tax=Bacteroides vulgatus RepID=D4V3Z9_BACVU
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:KDS30361.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_058_000M1_scaffold_1923_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2388..3881)
DNA (1494bp) protein (498aa)
PA domain protein n=5 Tax=root RepID=C6ZAJ4_9BACE
aminopeptidase
Peptidase M20/M25/M40 family protein {ECO:0000313|EMBL:KDS55274.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_058_000M1_scaffold_1923_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4128..5393
DNA (1266bp) protein (422aa)
MATE efflux family protein n=2 Tax=Bacteroides vulgatus RepID=D4V401_BACVU
transmembrane transport efflux protein
MATE efflux family protein {ECO:0000313|EMBL:KDS55273.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_058_000M1_scaffold_1923_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5487..6833
DNA (1347bp) protein (449aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Adenylosuccinate lyase n=6 Tax=Bacteroides RepID=A6L0U3_BACV8
L3_058_000M1_scaffold_1923_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6909..8375
DNA (1467bp) protein (489aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Pseudouridine synthase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L0U4_BACV8
ribosomal large subunit pseudouridine synthase B
L3_058_000M1_scaffold_1923_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8398..9801
DNA (1404bp) protein (468aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00534}; EC=6.1.1.22 {ECO:0000255|HAMAP-Rule:MF_00534};; Asparaginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00534}; Short=AsnRS {ECO:0000255|HAMAP-Rule:MF_00534};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Asparagine--tRNA ligase n=4 Tax=Bacteroides RepID=SYN_BACV8
L3_058_000M1_scaffold_1923_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9964..10458
DNA (495bp) protein (165aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L0U6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS55269.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_058_000M1_scaffold_1923_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10819..11394
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L0U7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR97615.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_058_000M1_scaffold_1923_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11384..11629
DNA (246bp) protein (82aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6ZAI7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS30352.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_058_000M1_scaffold_1923_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11929..12390
DNA (462bp) protein (154aa)
50S ribosomal protein L13 n=14 Tax=Bacteroides RepID=A6L0U9_BACV8
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_058_000M1_scaffold_1923_15
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12397..12783
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=13 Tax=Bacteroides RepID=RS9_BACV8
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
L3_058_000M1_scaffold_1923_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


12916..13755
DNA (840bp) protein (280aa)
30S ribosomal protein S2 n=8 Tax=Bacteroides RepID=RS2_BACV8
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_058_000M1_scaffold_1923_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13888..14877
DNA (990bp) protein (330aa)
Elongation factor Ts n=8 Tax=root RepID=EFTS_BACV8
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_058_000M1_scaffold_1923_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14936..15274)
DNA (339bp) protein (113aa)
Uncharacterized protein n=7 Tax=root RepID=R7NXR8_9BACE
translation initiation factor SUI1
Uncharacterized protein {ECO:0000313|EMBL:CDF17530.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_058_000M1_scaffold_1923_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15392..16042
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=8 Tax=root RepID=A6L0V4_BACV8
redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying 19 items

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