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L3_058_000M1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_15_1
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(788..1498)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H7Q8_9BACT
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:KHM44202.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L3_058_000M1_scaffold_15_2
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1491..4706)
DNA (3216bp) protein (1072aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WXN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM44203.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L3_058_000M1_scaffold_15_3
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4708..5577)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YXP7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KHM44204.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L3_058_000M1_scaffold_15_4
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5567..5893)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y1T8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21368.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_058_000M1_scaffold_15_5
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5890..6504)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y9F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21369.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_058_000M1_scaffold_15_6
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6527..7354)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=root RepID=R5Y3D6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21370.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_058_000M1_scaffold_15_7
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7351..7977)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YJ54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21371.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_058_000M1_scaffold_15_8
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8522..8878)
DNA (357bp) protein (119aa)
SigF n=3 Tax=Campylobacter RepID=H7SZM8_CAMCO
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22770.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
L3_058_000M1_scaffold_15_9
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8875..10890)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1P3X7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY10311.1}; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 332 str. F0381.;"
hypothetical protein
L3_058_000M1_scaffold_15_10
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10944..12065)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5M961_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY81672.1}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1185.;"
hypothetical protein
L3_058_000M1_scaffold_15_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12111..13499)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BER7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95069.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
putative ATP/GTP-binding protein
L3_058_000M1_scaffold_15_12
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13751..14074
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LGA8_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF13677.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_058_000M1_scaffold_15_13
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14184..14822
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XAD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM48766.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L3_058_000M1_scaffold_15_14
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15555..16382)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X004_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64757.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
methionine sulfoxide reductase
L3_058_000M1_scaffold_15_15
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16394..17089)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EZ35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96504.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Putative predicted metal-dependent hydrolase
L3_058_000M1_scaffold_15_16
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17089..20223)
DNA (3135bp) protein (1045aa)
Type I restriction-modification system, subunit R (EC:3.1.21.3)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XLQ2_9PORP
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EJZ64755.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_058_000M1_scaffold_15_17
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20228..21433)
DNA (1206bp) protein (402aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ00_NITHN
restriction modification system DNA specificity domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
L3_058_000M1_scaffold_15_18
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21487..23910)
DNA (2424bp) protein (808aa)
Type I restriction-modification system (EC:2.1.1.72)
Type I restriction-modification system, M subunit n=2 Tax=root RepID=K0WZY3_9PORP
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EJZ64753.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_058_000M1_scaffold_15_19
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23949..25073)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=3 Tax=root RepID=K0X002_9PORP
Prokaryotic ATPase {ECO:0000313|EMBL:CCX95334.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_058_000M1_scaffold_15_20
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25485..28475)
DNA (2991bp) protein (997aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X2I6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95335.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
outer membrane assembly protein
L3_058_000M1_scaffold_15_21
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28719..29756
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XLP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64750.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
zinc-type alcohol dehydrogenase
L3_058_000M1_scaffold_15_22
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30488..30856)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XAD2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64749.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
membrane protein
L3_058_000M1_scaffold_15_23
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31092..31580
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ES18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95338.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_058_000M1_scaffold_15_24
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31615..33063
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WZZ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64747.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L3_058_000M1_scaffold_15_25
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33082..33597
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X2I2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95340.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
nodulation efficiency protein D (NfeD)
L3_058_000M1_scaffold_15_26
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33602..34576
DNA (975bp) protein (325aa)
UPF0365 protein HMPREF9448_01228 n=2 Tax=Bacteroidales RepID=K0XLN9_9PORP
UPF0365 protein HMPREF9448_01228 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L3_058_000M1_scaffold_15_27
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34713..35291
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Superoxide dismutase n=2 Tax=Bacteroidales RepID=K0XAC7_9PORP
superoxide dismutase
L3_058_000M1_scaffold_15_28
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35540..36901
DNA (1362bp) protein (454aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain 1 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ES23_9BACE
L3_058_000M1_scaffold_15_29
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37405..37569
DNA (165bp) protein (55aa)
Rubredoxin n=2 Tax=Bacteroidales RepID=K0WZT7_9PORP
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
rubredoxin
L3_058_000M1_scaffold_15_30
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37738..38421
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERP7_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX95345.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
transcriptional regulator
Displaying items 1-30 of 161 in total

View Taxonomy