name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_058_000M1_scaffold_58_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1..1785)
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Collagen triple helix repeat (20 copies) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7S8_9FIRM
Collagen triple helix repeat (20 copies) {ECO:0000313|EMBL:CBL15673.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Collagen triple helix repeat (20 copies).
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L3_058_000M1_scaffold_58_2
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1782..2384)
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Transcriptional regulator n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7S7_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL15672.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_3
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2484..3626)
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Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7S6_9FIRM
Signal transduction histidine kinase
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L3_058_000M1_scaffold_58_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3623..4300)
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Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=root RepID=D4L7S5_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL15670.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_5
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4594..5556
|
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E068_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82227.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
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L3_058_000M1_scaffold_58_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5562..6527
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Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1Y5_9FIRM
Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:CCX82226.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
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L3_058_000M1_scaffold_58_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6858..7670)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82223.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
7949..8302
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Predicted transcriptional regulators n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7S3_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL15668.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8669..9193)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82216.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
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L3_058_000M1_scaffold_58_10
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9565..10365)
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sodium ABC transporter permease n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C08B5
CAAX protease
Abortive infection protein {ECO:0000313|EMBL:GAE89693.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
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L3_058_000M1_scaffold_58_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10533..10997)
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Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7R7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15662.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11162..11692)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82945.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
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L3_058_000M1_scaffold_58_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11756..12025)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82953.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12054..12935)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E454_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82946.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12932..13336)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82948.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(13349..13885)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E458_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82951.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14149..15171)
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Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82953.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15340..15765)
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SUF system FeS assembly protein, NifU family n=2 Tax=Ruminococcus RepID=D4L7R5_9FIRM
SUF system FeS assembly protein, NifU family
SUF system FeS assembly protein NifU family {ECO:0000313|EMBL:CCX82957.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15755..16972)
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Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DVL5_9FIRM
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L3_058_000M1_scaffold_58_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16953..18038)
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ABC-type transport system involved in Fe-S cluster assembly permease component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRR0_9FIRM
ABC-type transport system involved in Fe-S cluster assembly permease component {ECO:0000313|EMBL:CCX82960.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
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L3_058_000M1_scaffold_58_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18049..19455)
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Iron-regulated ABC transporter membrane component SufB n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7R2_9FIRM
Iron-regulated ABC transporter membrane component SufB
Iron-regulated ABC transporter membrane component SufB {ECO:0000313|EMBL:CBL15657.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(19469..20230)
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Iron-regulated ABC transporter ATPase subunit SufC n=2 Tax=Ruminococcus RepID=D4L7R1_9FIRM
Iron-regulated ABC transporter ATPase subunit SufC
Iron-regulated ABC transporter ATPase subunit SufC {ECO:0000313|EMBL:CCX82963.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
20384..20821
|
Transcriptional regulator, BadM/Rrf2 family n=2 Tax=Ruminococcus RepID=D4L7R0_9FIRM
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CCX82964.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
transcriptional regulator, BadM/Rrf2 family
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L3_058_000M1_scaffold_58_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
20953..21549
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Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DRR5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15654.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_25
unknown
|
Not on your lists |
21582..21884
|
This feature has no annotations |
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L3_058_000M1_scaffold_58_26
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21949..22200)
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Protein translocase, SecG subunit n=3 Tax=root RepID=D4L7Q8_9FIRM
protein translocase, SecG subunit
Protein translocase, SecG subunit {ECO:0000313|EMBL:CBL15653.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
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L3_058_000M1_scaffold_58_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22326..24569)
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Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit {ECO:0000313|EMBL:CBL15652.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CBL15652.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7Q7_9FIRM
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L3_058_000M1_scaffold_58_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24586..26571)
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Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRS5_9FIRM
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit {ECO:0000313|EMBL:CCX82975.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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L3_058_000M1_scaffold_58_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(26587..28554)
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UvrABC system protein B n=2 Tax=root RepID=R5E484_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Excinuclease ABC subunit B
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L3_058_000M1_scaffold_58_30
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(28707..29414)
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DNA repair proteins n=3 Tax=root RepID=D4L7Q4_9FIRM
DNA repair proteins
DNA repair proteins {ECO:0000313|EMBL:CCX82977.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
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