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L3_058_000M1_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_92_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

322..546
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X3P6_9PORP
Putative acetate kinase {ECO:0000313|EMBL:KDS52105.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_058_000M1_scaffold_92_2
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(555..1385)
DNA (831bp) protein (277aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LG49_PARD8
hypothetical protein
Metallo-beta-lactamase domain-containing protein {ECO:0000313|EMBL:EFI09970.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_058_000M1_scaffold_92_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1447..2049)
DNA (603bp) protein (201aa)
TIGR00730 family protein n=3 Tax=Bacteroidales RepID=C7X3P8_9PORP
TIGR00730 family protein {ECO:0000313|EMBL:EEU52518.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
lysine decarboxylase
L3_058_000M1_scaffold_92_4
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2056..2802)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDB1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48283.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_058_000M1_scaffold_92_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2804..3511)
DNA (708bp) protein (236aa)
DNA alkylation repair enzyme n=7 Tax=Bacteroidales RepID=E1YZP7_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN30091.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_058_000M1_scaffold_92_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3508..4467)
DNA (960bp) protein (320aa)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IGC4_9PORP
D-isomer specific 2-hydroxyacid dehydrogenase family protein {ECO:0000313|EMBL:CDB48285.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
D-isomer specific 2-hydroxyacid dehydrogenase
L3_058_000M1_scaffold_92_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4552..5781
DNA (1230bp) protein (410aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LG54_PARD8
hypothetical protein
Spore maturation protein A/spore maturation protein B {ECO:0000313|EMBL:EFI09975.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_058_000M1_scaffold_92_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5872..6300
DNA (429bp) protein (143aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Endoribonuclease YbeY n=4 Tax=Parabacteroides RepID=YBEY_PARD8
hypothetical protein
L3_058_000M1_scaffold_92_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6354..7160
DNA (807bp) protein (269aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LG56_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN19066.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_058_000M1_scaffold_92_10
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7181..7354
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BTG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48289.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_058_000M1_scaffold_92_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7327..7965)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=C7X3Q5_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09978.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_058_000M1_scaffold_92_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8111..9259)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JDK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48292.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_058_000M1_scaffold_92_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9378..11255
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=4 Tax=Bacteroidales RepID=D0TF88_9BACE
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L3_058_000M1_scaffold_92_14
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11300..12937
DNA (1638bp) protein (546aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Adenine deaminase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IPA1_9PORP
adenine deaminase
L3_058_000M1_scaffold_92_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12934..14769
DNA (1836bp) protein (612aa)
UvrABC system protein C n=6 Tax=Bacteroidales RepID=A6LG61_PARD8
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
uvrC; excinuclease ABC subunit C
L3_058_000M1_scaffold_92_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14786..15238
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
D-tyrosyl-tRNA(Tyr) deacylase n=9 Tax=Bacteroidales RepID=DTD_PARD8
D-tyrosyl-tRNA(Tyr) deacylase
L3_058_000M1_scaffold_92_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15241..15573
DNA (333bp) protein (111aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LG63_PARD8
hypothetical protein
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EEU52531.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_92_18
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15578..16516
DNA (939bp) protein (313aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Deoxyribose-phosphate aldolase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDC5_9PORP
deoxyribose-phosphate aldolase
L3_058_000M1_scaffold_92_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16708..17745)
DNA (1038bp) protein (346aa)
Polyprenyl synthetase n=2 Tax=Bacteroidales RepID=R6IPA6_9PORP
Polyprenyl synthetase {ECO:0000313|EMBL:CDB48299.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
polyprenyl synthetase
L3_058_000M1_scaffold_92_20
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17784..20549
DNA (2766bp) protein (922aa)
DNA polymerase I n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IGD7_9PORP
DNA polymerase I {ECO:0000313|EMBL:CDB48300.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
DNA polymerase I
L3_058_000M1_scaffold_92_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20760..21908
DNA (1149bp) protein (383aa)
Protein AraJ n=6 Tax=Bacteroidales RepID=C7X3R5_9PORP
MFS transport protein AraJ
Putative transmembrane efflux protein {ECO:0000313|EMBL:ABR44681.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_92_22
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22115..23218
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=5 Tax=Parabacteroides RepID=A6LG81_PARD8
ychF; GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_058_000M1_scaffold_92_23
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23314..24228
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDD0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48303.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Tol biopolymer transport system periplasmic protein
L3_058_000M1_scaffold_92_24
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24220..25365)
DNA (1146bp) protein (382aa)
Transcriptional regulator, AraC family n=7 Tax=Bacteroidales RepID=C7X3R8_9PORP
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EKN31469.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_058_000M1_scaffold_92_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25570..26538
DNA (969bp) protein (323aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LG84_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74505.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_058_000M1_scaffold_92_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27041..27988
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LG86_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44700.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_92_27
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28017..28655
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JDM4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48307.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_058_000M1_scaffold_92_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28667..29179
DNA (513bp) protein (171aa)
Sigma-70 region 2 n=5 Tax=Bacteroidales RepID=C7X3S3_9PORP
RNA polymerase ECF-type sigma factor
Sigma-70 region 2 {ECO:0000313|EMBL:EEU52543.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_92_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29172..29564
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LG89_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU52544.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_92_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29569..30033
DNA (465bp) protein (155aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LG90_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS74510.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 97 in total

View Taxonomy