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L3_058_000M1_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_118_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..816)
DNA (816bp) protein (272aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H802_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU95968.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_058_000M1_scaffold_118_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(948..2300)
DNA (1353bp) protein (451aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H801_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU95967.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_058_000M1_scaffold_118_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2807..3658
DNA (852bp) protein (284aa)
Transcriptional regulator, RpiR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Z8_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EEU95965.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transcriptional regulators
L3_058_000M1_scaffold_118_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3709..4722)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95963.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_058_000M1_scaffold_118_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4907..6403
DNA (1497bp) protein (499aa)
Stage IV sporulation protein A n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Z6_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:EEU95962.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
stage IV sporulation protein A
L3_058_000M1_scaffold_118_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6574..7404)
DNA (831bp) protein (277aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Z5_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEU95961.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_058_000M1_scaffold_118_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7407..7718)
DNA (312bp) protein (104aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Z0_9FIRM
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EEU95956.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Branched-chain amino acid transport protein (AzlD).
L3_058_000M1_scaffold_118_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7715..8476)
DNA (762bp) protein (254aa)
AzlC protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Y9_9FIRM
AzlC protein {ECO:0000313|EMBL:EEU95955.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L3_058_000M1_scaffold_118_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8604..10415)
DNA (1812bp) protein (604aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAM6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP21594.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_118_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10417..12726)
DNA (2310bp) protein (770aa)
ABC transporter, ATP-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Y4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU96046.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_118_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12719..13219)
DNA (501bp) protein (167aa)
Transcriptional regulator, MarR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Y3_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEU96045.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, MarR family
L3_058_000M1_scaffold_118_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13372..13878)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96044.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function (DUF2812).
L3_058_000M1_scaffold_118_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13875..14192)
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Y1_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EEU96043.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, PadR family
L3_058_000M1_scaffold_118_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14330..14662)
DNA (333bp) protein (111aa)
Transglycosylase associated protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7Y0_9FIRM
Transglycosylase associated protein {ECO:0000313|EMBL:EEU96042.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transglycosylase associated protein.
L3_058_000M1_scaffold_118_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14659..15360)
DNA (702bp) protein (234aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X9_9FIRM
L3_058_000M1_scaffold_118_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15549..16823
DNA (1275bp) protein (425aa)
ATPase, AAA family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X7_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EEU96039.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Recombination protein MgsA
L3_058_000M1_scaffold_118_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16847..17233
DNA (387bp) protein (129aa)
Transcriptional regulator, Fur family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X6_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EEU96038.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Fe2+/Zn2+ uptake regulation proteins
L3_058_000M1_scaffold_118_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17334..18716
DNA (1383bp) protein (461aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X5_9FIRM
L3_058_000M1_scaffold_118_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18786..19193
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96036.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein of unknown function (DUF964).
L3_058_000M1_scaffold_118_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19314..21929
DNA (2616bp) protein (872aa)
DNA mismatch repair protein MutS n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X3_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA mismatch repair protein MutS
L3_058_000M1_scaffold_118_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21969..24119
DNA (2151bp) protein (717aa)
DNA mismatch repair protein MutL n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X2_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA mismatch repair protein MutL
L3_058_000M1_scaffold_118_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24103..25053
DNA (951bp) protein (317aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X1_9FIRM
L3_058_000M1_scaffold_118_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25059..26366
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96032.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_058_000M1_scaffold_118_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26474..26938
DNA (465bp) protein (155aa)
Cell division protein SepF n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7W9_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_058_000M1_scaffold_118_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26922..27743
DNA (822bp) protein (274aa)
S4 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7W8_9FIRM
S4 domain protein {ECO:0000313|EMBL:EEU96030.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized conserved protein, contains S4-like domain
L3_058_000M1_scaffold_118_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27765..28562
DNA (798bp) protein (266aa)
DivIVA domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7W7_9FIRM
DivIVA domain protein {ECO:0000313|EMBL:EEU96029.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DivIVA domain
L3_058_000M1_scaffold_118_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28602..31394
DNA (2793bp) protein (931aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ileS; Isoleucine-tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7W6_9FIRM
L3_058_000M1_scaffold_118_28
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31496..31981
DNA (486bp) protein (162aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAT6_9FIRM
L3_058_000M1_scaffold_118_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31985..32929
DNA (945bp) protein (315aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase, RluA family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7W3_9FIRM
L3_058_000M1_scaffold_118_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32926..33762
DNA (837bp) protein (279aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7W2_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EEU96024.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted hydrolases of the HAD superfamily
Displaying items 1-30 of 164 in total

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