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L3_058_000M1_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_124_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1273..1740)
DNA (468bp) protein (156aa)
SsrA-binding protein n=4 Tax=Eubacterium RepID=C4Z971_EUBR3
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_124_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1972..4122)
DNA (2151bp) protein (717aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribonuclease R n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z970_EUBR3
ribonuclease R
L3_058_000M1_scaffold_124_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4215..4454)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68865.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_058_000M1_scaffold_124_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4598..4786)
DNA (189bp) protein (63aa)
Large-conductance mechanosensitive channel, MscL n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIQ8_9FIRM
Large-conductance mechanosensitive channel, MscL.
Large-conductance mechanosensitive channel, MscL {ECO:0000313|EMBL:CBK93505.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_124_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4856..5794
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4Z967_EUBR3
Transglutaminase-like enzymes, putative cysteine proteases
Transglutaminase-like enzymes, putative cysteine proteases {ECO:0000313|EMBL:CBK93506.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_124_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5805..6830
DNA (1026bp) protein (342aa)
Fimbrial assembly protein PilC n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z966_EUBR3
fimbrial assembly protein PilC
Fimbrial assembly protein PilC {ECO:0000313|EMBL:ACR75288.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6847..7167
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIR1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93508.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_124_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7171..7653
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3U5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75286.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7749..8216
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4Z963_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75285.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8213..8725
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3U7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK90087.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_124_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8727..9788
DNA (1062bp) protein (354aa)
Predicted ATPase involved in pili biogenesis, PilT-like protein n=4 Tax=Eubacterium RepID=C4Z961_EUBR3
pilus retraction protein PilT
Predicted ATPase involved in pili biogenesis, PilT-like protein {ECO:0000313|EMBL:ACR75283.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9913..11364)
DNA (1452bp) protein (484aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Adenylosuccinate lyase n=3 Tax=Eubacterium RepID=C4Z960_EUBR3
adenylosuccinate lyase
L3_058_000M1_scaffold_124_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11378..12940)
DNA (1563bp) protein (521aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Amidophosphoribosyltransferase n=2 Tax=Eubacterium RepID=C4Z959_EUBR3
amidophosphoribosyltransferase
L3_058_000M1_scaffold_124_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12990..13865)
DNA (876bp) protein (292aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=3 Tax=Eubacterium RepID=C4Z958_EUBR3
phosphoribosylaminoimidazole-succinocarboxamide synthase
L3_058_000M1_scaffold_124_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14088..15629)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=4 Tax=Eubacterium RepID=C4Z957_EUBR3
L3_058_000M1_scaffold_124_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15807..16556)
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Triosephosphate isomerase n=4 Tax=Eubacterium RepID=C4Z956_EUBR3
tpiA; triosephosphate isomerase
L3_058_000M1_scaffold_124_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16627..17859)
DNA (1233bp) protein (411aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Phosphoglycerate kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z955_EUBR3
phosphoglycerate kinase
L3_058_000M1_scaffold_124_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18051..19067)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=5 Tax=root RepID=C4Z954_EUBR3
glyceraldehyde-3-phosphate dehydrogenase, type I
L3_058_000M1_scaffold_124_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19384..20190
DNA (807bp) protein (269aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z952_EUBR3
histidinol phosphate phosphatase HisJ family
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:ACR75274.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20895..22202)
DNA (1308bp) protein (436aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Nicotinate phosphoribosyltransferase n=2 Tax=Eubacterium rectale RepID=C4Z951_EUBR3
nicotinate phosphoribosyltransferase
L3_058_000M1_scaffold_124_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22372..26175)
DNA (3804bp) protein (1268aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CBK93522.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CBK93522.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIS5_9FIRM
L3_058_000M1_scaffold_124_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26428..27318
DNA (891bp) protein (297aa)
Transcriptional regulatory protein, LysR family n=2 Tax=Eubacterium RepID=C4Z949_EUBR3
LysR family transcriptional regulator
Transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:ACR75271.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27289..29757)
DNA (2469bp) protein (823aa)
Putative ATP-dependent DNA-repair helicase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z948_EUBR3
Putative ATP-dependent DNA-repair helicase {ECO:0000313|EMBL:ACR75270.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
putative ATP-dependent DNA-repair helicase
L3_058_000M1_scaffold_124_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29812..30045)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TLU2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75269.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_124_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30322..31227)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=3 Tax=Eubacterium RepID=C4Z946_EUBR3
LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:CDC68818.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_058_000M1_scaffold_124_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31320..32081)
DNA (762bp) protein (254aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9C1_9FIRM
L3_058_000M1_scaffold_124_27
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32119..32964)
DNA (846bp) protein (282aa)
Ribosome biogenesis GTPase A n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UDD1_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ribosome biogenesis GTP-binding protein YlqF
L3_058_000M1_scaffold_124_28
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33004..33588)
DNA (585bp) protein (195aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Signal peptidase I n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9B7_9FIRM
L3_058_000M1_scaffold_124_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33734..34087)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=3 Tax=Eubacterium RepID=D4JIT3_9FIRM
ribosomal protein L19, bacterial type
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_124_30
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34229..35845)
DNA (1617bp) protein (539aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6T9B2_9FIRM
tRNA (guanine-N1)-methyltransferase
Displaying items 1-30 of 119 in total

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