ggKbase home page

L3_058_000M1_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_150_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

221..3559
DNA (3339bp) protein (1113aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7L1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12331.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_058_000M1_scaffold_150_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3672..6632)
DNA (2961bp) protein (987aa)
Exonuclease SbcCD, C subunit n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AHV4_9PORP
Exonuclease SbcCD, C subunit {ECO:0000313|EMBL:EDN85921.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP-dependent exonuclease sbcC
L3_058_000M1_scaffold_150_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6629..7873)
DNA (1245bp) protein (415aa)
Exonuclease SbcCD, D subunit n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AHV3_9PORP
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EDN85920.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
exonuclease
L3_058_000M1_scaffold_150_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8045..9715
DNA (1671bp) protein (557aa)
TrkA C-terminal domain protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AHV2_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EDN85919.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9720..10904)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AHV1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85918.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_6
unknown

Not on your lists

10948..11106
DNA (159bp) protein (53aa)

This feature has no annotations

L3_058_000M1_scaffold_150_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11194..11745)
DNA (552bp) protein (184aa)
Rubredoxin n=7 Tax=Parabacteroides RepID=B7BC73_9PORP
Rubredoxin {ECO:0000313|EMBL:EDN85917.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rubrerythrin
L3_058_000M1_scaffold_150_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11935..12993
DNA (1059bp) protein (353aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Deoxyribose-phosphate aldolase n=3 Tax=Parabacteroides merdae RepID=A7AHU9_9PORP
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EDN85916.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_058_000M1_scaffold_150_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13058..15163)
DNA (2106bp) protein (702aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Parabacteroides merdae RepID=A7AHU8_9PORP
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDN85915.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
peptidase
L3_058_000M1_scaffold_150_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15270..15758
DNA (489bp) protein (163aa)
Sporulation and cell division repeat protein n=5 Tax=Parabacteroides RepID=A7AHU7_9PORP
Sporulation and cell division repeat protein {ECO:0000313|EMBL:EDN85914.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15873..17660)
DNA (1788bp) protein (596aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Elongation factor 4 n=4 Tax=Parabacteroides RepID=A7AHU6_9PORP
GTP-binding protein LepA
L3_058_000M1_scaffold_150_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17746..19923
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BYY7_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN85912.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19991..20167)
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHU4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14273.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_058_000M1_scaffold_150_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20384..21253)
DNA (870bp) protein (290aa)
Kinase PfkB family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X556_9PORP
Kinase PfkB family {ECO:0000313|EMBL:CDD14274.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
fructokinase
L3_058_000M1_scaffold_150_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21439..24171)
DNA (2733bp) protein (911aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7AHU2_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN85909.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component system sensor kinase/response regulator
L3_058_000M1_scaffold_150_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24268..24735
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AHU0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85908.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24975..26804)
DNA (1830bp) protein (610aa)
Peptidase U32 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y785_9PORP
Peptidase U32 family {ECO:0000313|EMBL:CDD14277.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
collagenase
L3_058_000M1_scaffold_150_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26827..27759)
DNA (933bp) protein (311aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=4 Tax=Parabacteroides RepID=A7AHT7_9PORP
L3_058_000M1_scaffold_150_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27868..30273
DNA (2406bp) protein (802aa)
TonB-dependent receptor n=2 Tax=Parabacteroides merdae RepID=A7AHT6_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN85903.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30418..30825
DNA (408bp) protein (136aa)
Methylmalonyl-CoA epimerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WY71_9PORP
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:CDD14280.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
lactoylglutathione lyase and-like protein
L3_058_000M1_scaffold_150_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30938..32491
DNA (1554bp) protein (518aa)
Carboxyl transferase domain protein n=4 Tax=Parabacteroides RepID=A7AHT4_9PORP
Carboxyl transferase domain protein {ECO:0000313|EMBL:EDN85901.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
methylmalonyl-CoA decarboxylase subunit alpha
L3_058_000M1_scaffold_150_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32513..33400
DNA (888bp) protein (296aa)
Sodium pump decarboxylase, gamma subunit n=4 Tax=Parabacteroides RepID=A7AHT3_9PORP
Sodium pump decarboxylase gamma subunit {ECO:0000313|EMBL:CDD14282.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_058_000M1_scaffold_150_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33423..33854
DNA (432bp) protein (144aa)
Biotin-requiring enzyme n=4 Tax=Parabacteroides RepID=A7AHT2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17281.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
biotin carboxyl carrier protein
L3_058_000M1_scaffold_150_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33859..35055
DNA (1197bp) protein (399aa)
Sodium ion-translocating decarboxylase, beta subunit n=4 Tax=Parabacteroides RepID=A7AHT1_9PORP
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDD14284.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
oxaloacetate decarboxylase subunit beta
L3_058_000M1_scaffold_150_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35248..35394)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AHT0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85897.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_058_000M1_scaffold_150_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35675..37723)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZNH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17279.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
putative helicase
L3_058_000M1_scaffold_150_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37765..38151)
DNA (387bp) protein (129aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A2K6_9PORP
Putative DNA-binding protein {ECO:0000313|EMBL:EDN85895.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38754..39473)
DNA (720bp) protein (240aa)
Universal bacterial protein YeaZ n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y792_9PORP
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CDD14287.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoprotease
L3_058_000M1_scaffold_150_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39709..40569
DNA (861bp) protein (287aa)
TIGR00255-like family protein n=4 Tax=Parabacteroides RepID=A7AHS4_9PORP
TIGR00255-like family protein {ECO:0000313|EMBL:EDN85891.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_150_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40579..41148
DNA (570bp) protein (190aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=3 Tax=Parabacteroides RepID=A7AHS3_9PORP
Displaying items 1-30 of 106 in total

View Taxonomy