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L3_058_000M1_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_172_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(456..1826)
DNA (1371bp) protein (457aa)
DNA repair protein radA n=2 Tax=Eubacterium RepID=D4JH42_9FIRM
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_172_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1884..2297)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=3 Tax=Eubacterium rectale RepID=C4ZD76_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92677.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_172_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2345..4801)
DNA (2457bp) protein (819aa)
ATPase AAA-2 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZD77_EUBR3
ATPase AAA-2 {ECO:0000313|EMBL:ACR76040.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
ATPase AAA-2
L3_058_000M1_scaffold_172_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4807..6837)
DNA (2031bp) protein (677aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZD78_EUBR3
Uncharacterized protein {ECO:0000313|EMBL:ACR76041.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
hypothetical protein
L3_058_000M1_scaffold_172_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6854..9226)
DNA (2373bp) protein (791aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZD79_EUBR3
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:ACR76042.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
L3_058_000M1_scaffold_172_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9438..10481)
DNA (1044bp) protein (348aa)
Predicted secreted protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYU7_9FIRM
Predicted secreted protein
Predicted secreted protein {ECO:0000313|EMBL:CBK91760.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_172_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10494..11531)
DNA (1038bp) protein (346aa)
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYU6_9FIRM
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF
Uncharacterized proteins, homologs of microcin C7 resistance protein MccF {ECO:0000313|EMBL:CBK91759.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_172_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11528..11827)
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TWE8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76046.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_172_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12038..12943)
DNA (906bp) protein (302aa)
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins (EC:1.97.1.4)
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U210_9FIRM
Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating proteins {ECO:0000313|EMBL:CDC74141.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_058_000M1_scaffold_172_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13232..14470
DNA (1239bp) protein (413aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
6-phosphofructokinase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UTV2_9FIRM
6-phosphofructokinase
L3_058_000M1_scaffold_172_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14535..15977
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TWF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC74144.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_058_000M1_scaffold_172_12
unknown

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comp(16297..16461)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_058_000M1_scaffold_172_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16623..18377)
DNA (1755bp) protein (585aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Eubacterium rectale M104/1 RepID=D4JH52_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK92686.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_172_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18381..20129)
DNA (1749bp) protein (583aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYT9_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK91752.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_172_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20252..20617)
DNA (366bp) protein (122aa)
Mn-dependent transcriptional regulator n=2 Tax=Eubacterium RepID=D4JH54_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBK92688.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_172_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20923..22071)
DNA (1149bp) protein (383aa)
Aminotransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UTW0_9FIRM
Aminotransferase {ECO:0000313|EMBL:CDC74152.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
aminotransferase
L3_058_000M1_scaffold_172_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22075..22926)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYT6_9FIRM
Protein of unknown function (DUF3737).
Uncharacterized protein {ECO:0000313|EMBL:CBK91749.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_172_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23087..24058)
DNA (972bp) protein (324aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBK91748.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBK91748.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L-lactate dehydrogenase n=3 Tax=Eubacterium rectale RepID=C4ZDA2_EUBR3
L-lactate dehydrogenase
L3_058_000M1_scaffold_172_19
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24394..26388)
DNA (1995bp) protein (665aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPP9_9FIRM
L3_058_000M1_scaffold_172_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26557..27477)
DNA (921bp) protein (307aa)
EDD domain protein, DegV family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYT3_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBK91746.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_172_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27477..28703)
DNA (1227bp) protein (409aa)
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases n=2 Tax=Eubacterium rectale RepID=D4JH60_9FIRM
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases {ECO:0000313|EMBL:CBK92694.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_172_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28690..32010)
DNA (3321bp) protein (1107aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYT1_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBK91744.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
diguanylate cyclase (GGDEF) domain
L3_058_000M1_scaffold_172_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32120..32764)
DNA (645bp) protein (215aa)
Thiamin pyrophosphokinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEU9_EUBR3
thiamin pyrophosphokinase
Thiamin pyrophosphokinase {ECO:0000313|EMBL:ACR76070.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_172_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32841..33491)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribulose-phosphate 3-epimerase n=2 Tax=Eubacterium rectale RepID=D6DYS9_9FIRM
ribulose-phosphate 3-epimerase
L3_058_000M1_scaffold_172_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(33520..34428)
DNA (909bp) protein (303aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000255|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_01820};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=RSGA_EUBR3
GTPase
L3_058_000M1_scaffold_172_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34927..37074)
DNA (2148bp) protein (716aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:CBK91740.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CBK91740.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYS7_9FIRM
L3_058_000M1_scaffold_172_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37091..37819)
DNA (729bp) protein (243aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Protein serine/threonine phosphatase n=4 Tax=Eubacterium RepID=C4ZEV4_EUBR3
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ACR76075.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_172_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37820..38884)
DNA (1065bp) protein (355aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Eubacterium RepID=C4ZEV5_EUBR3
radical SAM enzyme, Cfr family
L3_058_000M1_scaffold_172_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39081..40490)
DNA (1410bp) protein (470aa)
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYS4_9FIRM
L3_058_000M1_scaffold_172_30
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(40596..41300)
DNA (705bp) protein (235aa)
Predicted Zn-dependent protease n=4 Tax=Eubacterium RepID=C4ZEV7_EUBR3
Predicted Zn-dependent protease
Predicted Zn-dependent protease {ECO:0000313|EMBL:CDC74189.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Displaying items 1-30 of 123 in total

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