ggKbase home page

L3_058_000M1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_179_1
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..2558
DNA (2556bp) protein (852aa)
Penicillin binding protein 2 n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z087_EUBE2
penicillin binding protein 2
Penicillin binding protein 2 {ECO:0000313|EMBL:ACR72000.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_2
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2605..3351
DNA (747bp) protein (249aa)
Probable septum site-determining protein MinC n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZSN7_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
septum site-determining protein MinC
L3_058_000M1_scaffold_179_3
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3459..4271
DNA (813bp) protein (271aa)
Site-determining protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZYA7_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
septum site-determining protein MinD
L3_058_000M1_scaffold_179_4
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4320..4595
DNA (276bp) protein (92aa)
Cell division topological specificity factor n=2 Tax=Eubacterium RepID=MINE_EUBE2
cell division topological specificity factor
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_058_000M1_scaffold_179_5
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4609..5772
DNA (1164bp) protein (388aa)
Cell division protein FtsW n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZIL0_9FIRM
Cell division protein FtsW {ECO:0000313|EMBL:CDA39488.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
cell division protein FtsW
L3_058_000M1_scaffold_179_6
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5813..6208
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Methylglyoxal synthase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZSP2_9FIRM
methylglyoxal synthase
L3_058_000M1_scaffold_179_7
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6281..7330)
DNA (1050bp) protein (350aa)
Integrase/recombinase XerC n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZL00_9FIRM
Integrase/recombinase XerC {ECO:0000313|EMBL:CDA39490.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
integrase/recombinase XerC
L3_058_000M1_scaffold_179_8
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7427..8572)
DNA (1146bp) protein (382aa)
ATP-dependent RNA helicase DeaD n=2 Tax=Eubacterium RepID=C4Z094_EUBE2
ATP-dependent RNA helicase DeaD
ATP-dependent RNA helicase DeaD {ECO:0000313|EMBL:CDA39491.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_058_000M1_scaffold_179_9
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8718..9095)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AEF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39492.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_058_000M1_scaffold_179_10
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9273..9893
DNA (621bp) protein (207aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
LexA repressor n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z096_EUBE2
repressor LexA
L3_058_000M1_scaffold_179_11
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10242..10592)
DNA (351bp) protein (117aa)
Ribosomal silencing factor RsfS n=2 Tax=root RepID=R5ZL09_9FIRM
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_058_000M1_scaffold_179_12
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10596..11192)
DNA (597bp) protein (199aa)
Nicotinate-nucleotide adenylyltransferase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZYD4_9FIRM
Nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:CDA39496.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
nicotinate-nucleotide adenylyltransferase
L3_058_000M1_scaffold_179_13
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11204..11812)
DNA (609bp) protein (203aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=Eubacterium RepID=C4Z0A0_EUBE2
adenosine deaminase
L3_058_000M1_scaffold_179_14
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11809..12096)
DNA (288bp) protein (96aa)
Putative RNA-binding protein containing KH domain n=2 Tax=Eubacterium RepID=C4Z0A1_EUBE2
RNA-binding protein containing KH domain
Putative RNA-binding protein containing KH domain {ECO:0000313|EMBL:ACR72014.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_15
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12116..13408)
DNA (1293bp) protein (431aa)
GTPase Obg n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z0A2_EUBE2
GTP-binding protein
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_16
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13514..13804)
DNA (291bp) protein (97aa)
50S ribosomal protein L27 n=2 Tax=Eubacterium RepID=C4Z0A3_EUBE2
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
large subunit ribosomal protein L27
L3_058_000M1_scaffold_179_17
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13809..14135)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C4Z0A4_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72017.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_18
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14169..14477)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=2 Tax=Eubacterium RepID=RL21_EUBE2
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_19
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14628..15224)
DNA (597bp) protein (199aa)
Phosphatidylglycerophosphatase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZSS6_9FIRM
Phosphatidylglycerophosphatase {ECO:0000313|EMBL:CDA39504.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
phosphatidylglycerophosphatase
L3_058_000M1_scaffold_179_20
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15242..16471)
DNA (1230bp) protein (410aa)
Ribonuclease G n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZL62_9FIRM
Ribonuclease G {ECO:0000313|EMBL:CDA39505.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
ribonuclease G
L3_058_000M1_scaffold_179_21
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16475..17563)
DNA (1089bp) protein (363aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|RuleBase:RU003658, ECO:0000256|SAAS:SAAS00015841}; EC=5.3.1.16 {ECO:0000256|RuleBase:RU003658};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZYE9_9FIRM
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
L3_058_000M1_scaffold_179_22
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17586..18185)
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Eubacterium RepID=C4Z0A9_EUBE2
imidazoleglycerol-phosphate dehydratase
L3_058_000M1_scaffold_179_23
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18216..19550)
DNA (1335bp) protein (445aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Histidinol dehydrogenase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZIQ9_9FIRM
histidinol dehydrogenase
L3_058_000M1_scaffold_179_24
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19577..20227)
DNA (651bp) protein (217aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
ATP phosphoribosyltransferase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZSS8_9FIRM
hisG; ATP phosphoribosyltransferase catalytic subunit
L3_058_000M1_scaffold_179_25
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20227..21507)
DNA (1281bp) protein (427aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z0B2_EUBE2
histidyl-tRNA synthetase
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_26
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21618..22559)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZYF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39511.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_058_000M1_scaffold_179_27
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22576..23106)
DNA (531bp) protein (177aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Holliday junction resolvase RecU n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AEI9_9FIRM
recombination protein U
L3_058_000M1_scaffold_179_28
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23064..24065)
DNA (1002bp) protein (334aa)
Ribosomal large subunit pseudouridine synthase C n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZIR3_9FIRM
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:CDA39513.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
ribosomal large subunit pseudouridine synthase C
L3_058_000M1_scaffold_179_29
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24081..24656)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z0B6_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72029.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_058_000M1_scaffold_179_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24634..26472)
DNA (1839bp) protein (613aa)
UPF0313 protein EUBELI_01029 n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z0B7_EUBE2
hypothetical protein
UPF0313 protein EUBELI_01029 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Displaying items 1-30 of 86 in total

View Taxonomy