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L3_058_000M1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_204_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..724)
DNA (723bp) protein (241aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3QFG8_9BACE
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CBK69328.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_058_000M1_scaffold_204_2
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(801..1223)
DNA (423bp) protein (141aa)
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN n=7 Tax=Bacteroides RepID=D6D4T5_9BACE
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
HEPN domain protein {ECO:0000313|EMBL:EEZ02281.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_058_000M1_scaffold_204_3
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1220..1534)
DNA (315bp) protein (105aa)
Nucleotidyltransferase domain protein n=6 Tax=Bacteroides RepID=C3QFG6_9BACE
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EEO50700.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Nucleotidyltransferase domain.
L3_058_000M1_scaffold_204_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1750..2292)
DNA (543bp) protein (181aa)
Transposase and inactivated derivatives n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D4T7_9BACE
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBK69331.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_058_000M1_scaffold_204_5
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2524..4881)
DNA (2358bp) protein (786aa)
PAS domain S-box protein n=4 Tax=Bacteroides RepID=C3QFG3_9BACE
PAS domain S-box protein {ECO:0000313|EMBL:EEO50697.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
PAS domain S-box
L3_058_000M1_scaffold_204_6
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4969..5493)
DNA (525bp) protein (175aa)
Biotin carboxyl carrier protein n=7 Tax=Bacteroides RepID=D6D4T9_9BACE
biotin carboxyl carrier protein
Biotin-requiring enzyme {ECO:0000313|EMBL:EEO50696.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_058_000M1_scaffold_204_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5523..7034)
DNA (1512bp) protein (504aa)
biotin carboxylase (EC:6.4.1.2 6.3.4.14)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M6N9_9BACE
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EGN01006.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_058_000M1_scaffold_204_8
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7092..8636)
DNA (1545bp) protein (515aa)
propionyl-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
Carboxyl transferase domain protein n=5 Tax=Bacteroides RepID=C3QFG0_9BACE
Carboxyl transferase domain protein {ECO:0000313|EMBL:EEO50694.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_058_000M1_scaffold_204_9
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9149..10648
DNA (1500bp) protein (500aa)
Transporter, lactate permease (LctP) family n=5 Tax=root RepID=C3QFF8_9BACE
Transporter, lactate permease (LctP) family {ECO:0000313|EMBL:EEZ02289.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L-lactate transport
L3_058_000M1_scaffold_204_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10973..12082)
DNA (1110bp) protein (370aa)
Predicted kinase n=2 Tax=Bacteroides RepID=D6D4U3_9BACE
Predicted kinase
Putative uncharacterized protein {ECO:0000313|EMBL:EFI13640.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_058_000M1_scaffold_204_11
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12057..12791)
DNA (735bp) protein (245aa)
RNA ligase n=6 Tax=Bacteroides RepID=D6D4U4_9BACE
RNA ligase.
Uncharacterized protein {ECO:0000313|EMBL:EEZ02291.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_058_000M1_scaffold_204_12
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12835..13455)
DNA (621bp) protein (207aa)
Peptide chain release factor H n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M997_9BACE
Peptide chain release factor H {ECO:0000313|EMBL:EGM97612.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
prfH; peptide chain release factor-like protein
L3_058_000M1_scaffold_204_13
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13460..13747)
DNA (288bp) protein (96aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
RNA-splicing ligase RtcB n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M996_9BACE
hypothetical protein
L3_058_000M1_scaffold_204_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13778..14857)
DNA (1080bp) protein (360aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
RNA-splicing ligase RtcB n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D4U5_9BACE
hypothetical protein
L3_058_000M1_scaffold_204_15
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15373..15870
DNA (498bp) protein (166aa)
Thioredoxin n=1 Tax=Bacteroides sp. D22 RepID=D7J4D3_9BACE
Thioredoxin {ECO:0000313|EMBL:EFI13643.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
thioredoxin
L3_058_000M1_scaffold_204_16
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16058..16774)
DNA (717bp) protein (239aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides sp. D22 RepID=D7J4D4_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EFI13644.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Response regulator of the LytR/AlgR family
L3_058_000M1_scaffold_204_17
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16771..17880)
DNA (1110bp) protein (370aa)
Two-component system sensor histidine kinase n=1 Tax=Bacteroides sp. D22 RepID=D7J4D5_9BACE
Two-component system sensor histidine kinase {ECO:0000313|EMBL:EFI13645.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Putative regulator of cell autolysis
L3_058_000M1_scaffold_204_18
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17877..18959)
DNA (1083bp) protein (361aa)
Two-component system sensor histidine kinase, no kinase domain protein n=1 Tax=Bacteroides sp. D22 RepID=D7J4D6_9BACE
Two-component system sensor histidine kinase, no kinase domain protein {ECO:0000313|EMBL:EFI13646.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Putative regulator of cell autolysis
L3_058_000M1_scaffold_204_19
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19017..21494)
DNA (2478bp) protein (826aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JCZ2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY84529.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_058_000M1_scaffold_204_20
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21781..22491)
DNA (711bp) protein (237aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QFE9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO50683.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Protein of unknown function (DUF2500).
L3_058_000M1_scaffold_204_21
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22517..24601)
DNA (2085bp) protein (695aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=4 Tax=Bacteroides RepID=C3QFE8_9BACE
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEO50682.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_058_000M1_scaffold_204_22
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24669..26240)
DNA (1572bp) protein (524aa)
FOG: PKD repeat n=7 Tax=Bacteroides RepID=D6D4V3_9BACE
FOG: PKD repeat
PKD domain protein {ECO:0000313|EMBL:EEZ02301.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_058_000M1_scaffold_204_23
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26259..27419)
DNA (1161bp) protein (387aa)
BNR/Asp-box repeat. (EC:3.2.1.18)
BNR/Asp-box repeat {ECO:0000313|EMBL:CBK69348.1}; EC=3.2.1.18 {ECO:0000313|EMBL:CBK69348.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
BNR/Asp-box repeat n=6 Tax=Bacteroides RepID=D6D4V4_9BACE
L3_058_000M1_scaffold_204_24
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27406..28860)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9JCZ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97601.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
SusD family.
L3_058_000M1_scaffold_204_25
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28880..32164)
DNA (3285bp) protein (1095aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C3QFE4_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEO50678.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Outer membrane receptor proteins, mostly Fe transport
L3_058_000M1_scaffold_204_26
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32190..33422)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M984_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM97599.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Sugar phosphate permease
L3_058_000M1_scaffold_204_27
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33429..35069)
DNA (1641bp) protein (547aa)
Sialidase {ECO:0000313|EMBL:CDM04981.1}; EC=3.2.1.18 {ECO:0000313|EMBL:CDM04981.1};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
BNR/Asp-box repeat. (EC:3.2.1.18)
BNR/Asp-box repeat protein n=4 Tax=Bacteroides RepID=D4VR63_9BACE
L3_058_000M1_scaffold_204_28
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35186..36097)
DNA (912bp) protein (304aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=3 Tax=Bacteroides RepID=D6D4V9_9BACE
N-acetylneuraminate lyase {ECO:0000313|EMBL:EFI13655.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_058_000M1_scaffold_204_29
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36134..37150)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9JD01_9BACE
Kelch repeat protein {ECO:0000313|EMBL:EEZ02308.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_058_000M1_scaffold_204_30
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37198..37950)
DNA (753bp) protein (251aa)
Transcriptional regulator, GntR family n=7 Tax=Bacteroides RepID=D6D4W1_9BACE
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEZ02309.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
Displaying items 1-30 of 63 in total

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