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L3_058_000M1_scaffold_219

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_219_1
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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94..939
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=3 Tax=Bacteroides RepID=A5ZG78_9BACE
L3_058_000M1_scaffold_219_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

958..1311
DNA (354bp) protein (118aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=3 Tax=Bacteroides RepID=A5ZG79_9BACE
L3_058_000M1_scaffold_219_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1402..3693)
DNA (2292bp) protein (764aa)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB56_9BACE
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EIY22517.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta
L3_058_000M1_scaffold_219_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3838..5049)
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=A5ZG81_9BACE
Glucose/galactose transporter warning {ECO:0000313|EMBL:EIY22518.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative sugar transporter
L3_058_000M1_scaffold_219_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5129..6403)
DNA (1275bp) protein (425aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDM21192.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDM21192.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=2 Tax=Bacteroides caccae RepID=A5ZG82_9BACE
L3_058_000M1_scaffold_219_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6549..6812)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=3 Tax=Bacteroides RepID=A5ZG85_9BACE
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
LSU ribosomal protein L27P
L3_058_000M1_scaffold_219_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(6836..7153)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=3 Tax=Bacteroides RepID=A5ZG86_9BACE
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
LSU ribosomal protein L21P
L3_058_000M1_scaffold_219_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7369..8004)
DNA (636bp) protein (212aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
HAD hydrolase, family IA n=2 Tax=Bacteroides RepID=I8VB60_9BACE
HAD hydrolase, family IA {ECO:0000313|EMBL:EIY22522.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_219_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8043..8927)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q115_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22523.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_219_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8962..9474)
DNA (513bp) protein (171aa)
NlpC/P60 family protein n=2 Tax=Bacteroides caccae RepID=A5ZG90_9BACE
NlpC/P60 family protein {ECO:0000313|EMBL:EDM21200.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
lipoprotein
L3_058_000M1_scaffold_219_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9505..10209)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=A5ZG91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22525.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC-type multidrug transport system, ATPase component
L3_058_000M1_scaffold_219_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10248..11741)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0C6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22526.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_219_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11758..14595)
DNA (2838bp) protein (946aa)
Predicted Zn-dependent peptidases (EC:3.4.99.-)
Peptidase M16 inactive domain protein n=2 Tax=Bacteroides caccae RepID=A5ZG93_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22527.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_219_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14675..15475)
DNA (801bp) protein (267aa)
3-deoxy-8-phosphooctulonate synthase (EC:2.5.1.55)
3-deoxy-8-phosphooctulonate synthase n=3 Tax=Bacteroides RepID=A5ZG94_9BACE
3-deoxy-8-phosphooctulonate synthase {ECO:0000313|EMBL:EIY22528.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_219_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15555..16481)
DNA (927bp) protein (309aa)
Lipid kinase, YegS/Rv2252/BmrU family n=2 Tax=Bacteroides caccae RepID=A5ZG95_9BACE
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:EIY22529.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
L3_058_000M1_scaffold_219_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16539..17459)
DNA (921bp) protein (307aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V7W2_9BACE
L3_058_000M1_scaffold_219_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17830..18816)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22531.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_219_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18838..20859)
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22532.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
SusD family.
L3_058_000M1_scaffold_219_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20876..23986)
DNA (3111bp) protein (1037aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q125_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY22533.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane receptor for ferrienterochelin and colicins
L3_058_000M1_scaffold_219_20
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24014..25372)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9EQC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72616.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
IPT/TIG domain.
L3_058_000M1_scaffold_219_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25624..26844)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=3 Tax=Bacteroides caccae RepID=I8V7W7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22535.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_219_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26847..28145)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0D3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22536.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycosyl hydrolase family 88
L3_058_000M1_scaffold_219_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28305..32345)
DNA (4041bp) protein (1347aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VB76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22537.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
histidine kinase
L3_058_000M1_scaffold_219_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32461..35109)
DNA (2649bp) protein (883aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22538.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent Receptor Plug Domain.
L3_058_000M1_scaffold_219_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35131..36336)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22539.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_219_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36390..37034)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V7X2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22540.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L3_058_000M1_scaffold_219_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37051..38598)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0D8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22541.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_219_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38644..39345)
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA small subunit methyltransferase E n=3 Tax=root RepID=A5ZGA9_9BACE
16S ribosomal RNA methyltransferase RsmE
L3_058_000M1_scaffold_219_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39353..39955)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21220.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_058_000M1_scaffold_219_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39966..41216)
DNA (1251bp) protein (417aa)
Nucleoside transporter n=3 Tax=Bacteroides RepID=A5ZGB1_9BACE
Nucleoside transporter {ECO:0000313|EMBL:EIY22544.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
xanthosine permease
Displaying items 1-30 of 50 in total

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