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L3_058_000M1_scaffold_253

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_253_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

191..1381
DNA (1191bp) protein (397aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=5 Tax=Bacteroidales RepID=C7X3K9_9PORP
L3_058_000M1_scaffold_253_2
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1393..2889
DNA (1497bp) protein (499aa)
Polysaccharide biosynthesis family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFC8_9BACE
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EEY84003.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
polysaccharide biosynthesis protein
L3_058_000M1_scaffold_253_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2886..4976)
DNA (2091bp) protein (697aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X3K7_9PORP
two-component sensor histidine kinase
L3_058_000M1_scaffold_253_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5109..6467
DNA (1359bp) protein (453aa)
Hydrophobic domain protein n=4 Tax=Parabacteroides RepID=C7X3K6_9PORP
integral membrane protein
Hydrophobic domain protein {ECO:0000313|EMBL:EEU52476.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_253_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6488..8629
DNA (2142bp) protein (714aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LG07_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EEU52475.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_058_000M1_scaffold_253_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8769..9938)
DNA (1170bp) protein (390aa)
Aminopeptidase C n=5 Tax=Parabacteroides RepID=A6LG06_PARD8
aminopeptidase
Uncharacterized protein {ECO:0000313|EMBL:EKN19116.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_058_000M1_scaffold_253_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10012..11622)
DNA (1611bp) protein (537aa)
Peptidase, C69 family n=4 Tax=Parabacteroides RepID=C7X3K3_9PORP
Putative secreted peptidase {ECO:0000313|EMBL:ABR44619.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
secreted peptidase
L3_058_000M1_scaffold_253_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11870..13237)
DNA (1368bp) protein (456aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=4 Tax=Parabacteroides RepID=C7X3K2_9PORP
multidrug resistance protein
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:KDS74436.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_058_000M1_scaffold_253_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13276..16458)
DNA (3183bp) protein (1061aa)
Multidrug resistance protein mexB n=4 Tax=Parabacteroides RepID=A6LG03_PARD8
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EKN19119.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
multidrug resistance protein mexB
L3_058_000M1_scaffold_253_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16476..17576)
DNA (1101bp) protein (367aa)
Multidrug resistance protein n=4 Tax=Parabacteroides RepID=A6LG02_PARD8
multidrug resistance protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS74434.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_058_000M1_scaffold_253_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17710..18609)
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=4 Tax=Parabacteroides RepID=C7X3J9_9PORP
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABR44615.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_253_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18762..20537)
DNA (1776bp) protein (592aa)
ATP-dependent RNA helicase n=3 Tax=Parabacteroides RepID=A6LG00_PARD8
ATP-dependent RNA helicase
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KDS74432.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_058_000M1_scaffold_253_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20661..21716)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LFZ6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN31539.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_058_000M1_scaffold_253_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21790..22719)
DNA (930bp) protein (310aa)
Fructokinase n=5 Tax=Bacteroidales RepID=A6LFZ5_PARD8
fructokinase
Fructokinase {ECO:0000313|EMBL:EFI09920.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_058_000M1_scaffold_253_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22737..23348)
DNA (612bp) protein (204aa)
Sugar isomerase, KpsF/GutQ family n=9 Tax=Bacteroidales RepID=C7X3J2_9PORP
sugar isomerase
SIS domain protein {ECO:0000313|EMBL:KDS48999.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_058_000M1_scaffold_253_16
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23443..25089)
DNA (1647bp) protein (549aa)
Peptidase, M28 family n=4 Tax=Bacteroidales RepID=C7X3J1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31542.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_058_000M1_scaffold_253_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25094..26662)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFZ2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44606.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_253_18
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26837..28057
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AU37_9PORP
zinc protease YmxG
Uncharacterized protein {ECO:0000313|EMBL:EKN31544.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_058_000M1_scaffold_253_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28060..29253)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LFZ0_PARD8
hypothetical protein
Outer membrane insertion C-terminal signal domain protein {ECO:0000313|EMBL:KDS74423.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_058_000M1_scaffold_253_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29289..30689)
DNA (1401bp) protein (467aa)
Amino acid carrier protein n=5 Tax=Bacteroidales RepID=A6LFY9_PARD8
amino acid carrier protein
Sodium:alanine symporter family protein {ECO:0000313|EMBL:EFI09904.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_058_000M1_scaffold_253_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30877..33192
DNA (2316bp) protein (772aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LFY8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44602.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_253_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33232..33738
DNA (507bp) protein (169aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LFY7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU52455.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_253_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33741..34505)
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=4 Tax=Parabacteroides RepID=C7X3I4_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEU52454.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_058_000M1_scaffold_253_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34541..35269)
DNA (729bp) protein (243aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LFY5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44599.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_253_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35347..36711)
DNA (1365bp) protein (455aa)
Transporter n=2 Tax=Parabacteroides RepID=K6ATQ8_9PORP
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Na+-dependent transporter
L3_058_000M1_scaffold_253_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36830..37789
DNA (960bp) protein (320aa)
Site-specific recombinase, phage integrase family n=3 Tax=Parabacteroides RepID=C7X3I1_9PORP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEU52451.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
integrase/transposase
L3_058_000M1_scaffold_253_27
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38401..38991
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A6B1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48935.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_058_000M1_scaffold_253_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39010..40470
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LFY1_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44595.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_253_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40507..42594
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6B6P0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31555.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_058_000M1_scaffold_253_30
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42761..43879
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFI2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48932.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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