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L3_058_000M1_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_261_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..765
DNA (765bp) protein (255aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=3 Tax=Bacteroides RepID=A5ZFD5_9BACE
L3_058_000M1_scaffold_261_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

825..1274
DNA (450bp) protein (150aa)
Sporulation and cell division repeat protein n=3 Tax=Bacteroides RepID=A5ZFD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23349.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Sporulation related domain.
L3_058_000M1_scaffold_261_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1282..1875
DNA (594bp) protein (198aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=3 Tax=Bacteroides RepID=A5ZFD7_9BACE
L3_058_000M1_scaffold_261_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1995..4097)
DNA (2103bp) protein (701aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA primase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q2N1_9BACE
DNA primase
L3_058_000M1_scaffold_261_5
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4213..4986)
DNA (774bp) protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8VDE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71957.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_058_000M1_scaffold_261_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5193..6254)
DNA (1062bp) protein (354aa)
chorismate mutase (EC:2.5.1.54 5.4.99.5)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q373_9BACE
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EIY23353.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_261_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6259..7446)
DNA (1188bp) protein (396aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDM20902.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDM20902.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Aminotransferase, class I/II n=2 Tax=Bacteroides caccae RepID=A5ZFE2_9BACE
Aspartate/tyrosine/aromatic aminotransferase
L3_058_000M1_scaffold_261_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7421..8269)
DNA (849bp) protein (283aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=3 Tax=Bacteroides RepID=A5ZFE3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71960.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_058_000M1_scaffold_261_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8617..9579)
DNA (963bp) protein (321aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides caccae RepID=A5ZFE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23356.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_261_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9621..11525)
DNA (1905bp) protein (635aa)
RecQ family ATP-dependent DNA helicase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDF0_9BACE
RecQ family ATP-dependent DNA helicase {ECO:0000313|EMBL:EIY23357.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATP-dependent DNA helicase RecQ
L3_058_000M1_scaffold_261_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11518..13236)
DNA (1719bp) protein (573aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDM20906.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDM20906.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Single-stranded-DNA-specific exonuclease RecJ n=3 Tax=Bacteroides RepID=A5ZFE6_9BACE
single-stranded-DNA-specific exonuclease recJ
L3_058_000M1_scaffold_261_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13800..14234)
DNA (435bp) protein (145aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Bacteroides RepID=A5ZFE7_9BACE
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EIY23359.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_261_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14346..14876
DNA (531bp) protein (177aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Bacteroides RepID=A5ZFE8_9BACE
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EIY23360.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
translation factor SUA5
L3_058_000M1_scaffold_261_14
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14877..16670
DNA (1794bp) protein (598aa)
Chloride transporter, ClC family n=3 Tax=Bacteroides RepID=A5ZFE9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ71966.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Chloride channel protein EriC
L3_058_000M1_scaffold_261_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16732..17700
DNA (969bp) protein (323aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDF5_9BACE
L3_058_000M1_scaffold_261_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17765..18415
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=3 Tax=Bacteroides RepID=A5ZFG1_9BACE
L3_058_000M1_scaffold_261_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18422..20548
DNA (2127bp) protein (709aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9ESN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23364.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
competence protein
L3_058_000M1_scaffold_261_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20595..21632
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VAC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23365.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Exopolyphosphatase-related proteins
L3_058_000M1_scaffold_261_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21751..22404
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZFG4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23366.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_261_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22441..23832
DNA (1392bp) protein (464aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphoglucosamine mutase n=4 Tax=root RepID=A5ZFG5_9BACE
Phosphoglucosamine mutase {ECO:0000313|EMBL:EIY23367.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_261_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23944..26322)
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q388_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23368.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Outer membrane receptor proteins, mostly Fe transport
L3_058_000M1_scaffold_261_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26512..27846
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23369.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_058_000M1_scaffold_261_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27866..28468)
DNA (603bp) protein (201aa)
Transcriptional regulator, LuxR family n=4 Tax=root RepID=A5ZFG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73131.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
LuxR family transcriptional regulator
L3_058_000M1_scaffold_261_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28475..30136)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q2P7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23371.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
NAD-utilizing dehydrogenase
L3_058_000M1_scaffold_261_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30194..31561)
DNA (1368bp) protein (456aa)
DNA repair protein radA n=3 Tax=Bacteroides RepID=A5ZFH0_9BACE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA repair protein RadA
L3_058_000M1_scaffold_261_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31782..32420)
DNA (639bp) protein (213aa)
asparaginase (EC:3.5.1.1)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q391_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23373.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_261_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32944..35385
DNA (2442bp) protein (814aa)
Aspartate kinase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESP5_9BACE
Aspartate kinase {ECO:0000313|EMBL:EIY23374.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I
L3_058_000M1_scaffold_261_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35392..36600
DNA (1209bp) protein (403aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VAD0_9BACE
Putative homoserine kinase {ECO:0000313|EMBL:EIY23375.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_261_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36614..37915
DNA (1302bp) protein (434aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=3 Tax=Bacteroides RepID=A5ZFH5_9BACE
Threonine synthase {ECO:0000313|EMBL:CCZ73137.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_058_000M1_scaffold_261_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38092..38718)
DNA (627bp) protein (209aa)
thiamine diphosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=3 Tax=Bacteroides RepID=A5ZFH6_9BACE
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCZ73138.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Displaying items 1-30 of 61 in total

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