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L3_058_000M1_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_266_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..176)
DNA (174bp) protein (58aa)
Putative methyl-accepting chemotaxis protein (MCP) n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZC11_EUBR3
Methyl-accepting chemotaxis protein
Putative methyl-accepting chemotaxis protein (MCP) {ECO:0000313|EMBL:ACR74301.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_266_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(707..1483)
DNA (777bp) protein (259aa)
Predicted permeases n=3 Tax=Eubacterium RepID=D4JL14_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CDC72590.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_058_000M1_scaffold_266_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1480..1920)
DNA (441bp) protein (147aa)
Transcriptional regulator, MarR family n=1 Tax=Eubacterium rectale M104/1 RepID=D4JL15_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CBK94312.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_266_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2276..3673
DNA (1398bp) protein (466aa)
Putative efflux protein, MATE family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1V2_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK89392.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_266_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4096..5424
DNA (1329bp) protein (443aa)
Predicted ATPase (AAA+ superfamily) n=4 Tax=Eubacterium RepID=D4JL17_9FIRM
Predicted ATPase (AAA+ superfamily)
Uncharacterized protein {ECO:0000313|EMBL:ACR74293.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_266_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5482..6237
DNA (756bp) protein (252aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CBK94315.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CBK94315.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Exodeoxyribonuclease III n=1 Tax=Eubacterium rectale M104/1 RepID=D4JL18_9FIRM
L3_058_000M1_scaffold_266_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6256..8502)
DNA (2247bp) protein (749aa)
Alpha-glucosidases, family 31 of glycosyl hydrolases (EC:3.2.1.20)
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CBK94316.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CBK94316.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JL19_9FIRM
L3_058_000M1_scaffold_266_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8644..11037)
DNA (2394bp) protein (798aa)
Alpha-glucosidases family 31 of glycosyl hydrolases n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TXI3_9FIRM
Alpha-glucosidases family 31 of glycosyl hydrolases {ECO:0000313|EMBL:CDC72606.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Alpha-glucosidases, family 31 of glycosyl hydrolases
L3_058_000M1_scaffold_266_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11065..11886)
DNA (822bp) protein (274aa)
Sugar ABC transporter, permease-like protein n=4 Tax=Eubacterium RepID=C4ZBZ9_EUBR3
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK94318.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_266_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11899..12777)
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1U6_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK89386.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_266_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12808..14169)
DNA (1362bp) protein (454aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium RepID=R6TS39_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC72614.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_058_000M1_scaffold_266_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14539..15564
DNA (1026bp) protein (342aa)
Transcriptional regulators n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1U4_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK89384.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_266_13
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15617..16966)
DNA (1350bp) protein (450aa)
Putative efflux protein MATE family n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TGS7_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC72618.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
putative efflux protein, MATE family
L3_058_000M1_scaffold_266_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16994..17488)
DNA (495bp) protein (165aa)
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBZ4_EUBR3
G:T/U mismatch-specific DNA glycosylase
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:ACR74284.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_266_15
unknown

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comp(17498..17596)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_058_000M1_scaffold_266_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17659..18219)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZEL2_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74528.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_266_17
unknown

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comp(18230..18376)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_058_000M1_scaffold_266_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18401..18964)
DNA (564bp) protein (188aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TIV1_9FIRM
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:CDC69629.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_058_000M1_scaffold_266_19
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18991..20895)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UFS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69632.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_058_000M1_scaffold_266_20
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20892..23456)
DNA (2565bp) protein (855aa)
Putative ATP-binding protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TP18_9FIRM
Putative ATP-binding protein {ECO:0000313|EMBL:CDC69636.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_058_000M1_scaffold_266_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23472..23954)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TIW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69639.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_058_000M1_scaffold_266_22
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24065..24295
DNA (231bp) protein (77aa)
Transcriptional regulator XRE family n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0I4_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CCZ83780.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
hypothetical protein predicted by Glimmer/Critica
L3_058_000M1_scaffold_266_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24383..26014)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50725.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_058_000M1_scaffold_266_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26186..27661)
DNA (1476bp) protein (492aa)
Glycosidase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBZ1_EUBR3
glycosidase
Glycosidase {ECO:0000313|EMBL:ACR74281.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_266_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27651..30491)
DNA (2841bp) protein (947aa)
Alpha-galactosidase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZBZ0_EUBR3
Alpha-galactosidase {ECO:0000313|EMBL:ACR74280.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
alpha-galactosidase
L3_058_000M1_scaffold_266_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30531..31367)
DNA (837bp) protein (279aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Eubacterium rectale RepID=D4JL33_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK89378.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_266_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31367..32242)
DNA (876bp) protein (292aa)
ABC-type sugar transport system, permease component n=3 Tax=Eubacterium RepID=C4ZBY8_EUBR3
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ACR74278.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_266_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32239..33540)
DNA (1302bp) protein (434aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JL35_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK94332.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_266_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33729..34571
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1T5_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBK89375.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_266_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34574..35614)
DNA (1041bp) protein (347aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=2 Tax=Eubacterium RepID=D6E1T4_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBK89374.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying items 1-30 of 55 in total

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