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L3_058_000M1_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_273_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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616..1089
DNA (474bp) protein (158aa)
Thioredoxin n=8 Tax=Bacteroidales RepID=A6LCP6_PARD8
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ABR43460.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_273_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1174..1506
DNA (333bp) protein (111aa)
CGGC domain protein n=7 Tax=Bacteroidales RepID=C7X8U9_9PORP
metal-binding protein
CGGC domain protein {ECO:0000313|EMBL:EFK63459.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_058_000M1_scaffold_273_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1589..2137)
DNA (549bp) protein (183aa)
30S ribosomal protein S16 n=7 Tax=Bacteroidales RepID=RS16_PARD8
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_058_000M1_scaffold_273_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2274..2474
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YSD0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25850.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_058_000M1_scaffold_273_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2484..4121
DNA (1638bp) protein (546aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZYF7_9PORP
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:KDS59793.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_058_000M1_scaffold_273_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4118..5599)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LCP2_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EKN25852.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_058_000M1_scaffold_273_7
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5772..6383
DNA (612bp) protein (204aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=C7X8V4_9PORP
transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63464.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_058_000M1_scaffold_273_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6406..7470
DNA (1065bp) protein (355aa)
L-asparaginase I n=9 Tax=Bacteroidales RepID=A6LCP0_PARD8
L-asparaginase I
L-asparaginase, type I {ECO:0000313|EMBL:EKN25854.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_058_000M1_scaffold_273_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7520..8323
DNA (804bp) protein (268aa)
Metallo-beta-lactamase domain protein n=9 Tax=Bacteroidales RepID=C7X8V6_9PORP
metallo-beta-lactamase superfamily hydrolase
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEU51635.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_273_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8819..9814
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YSD6_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:KDS54036.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
nitroreductase
L3_058_000M1_scaffold_273_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9818..11884)
DNA (2067bp) protein (689aa)
Na+/H+ antiporter n=6 Tax=Bacteroidales RepID=A6LCN7_PARD8
Universal stress family protein {ECO:0000313|EMBL:KDS59662.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Na+/H+ antiporter
L3_058_000M1_scaffold_273_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12181..13461
DNA (1281bp) protein (427aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TJ83_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY81779.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_058_000M1_scaffold_273_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13492..15102
DNA (1611bp) protein (537aa)
Outer membrane insertion signal domain protein n=2 Tax=Parabacteroides RepID=E1YSD9_9PORP
Outer membrane insertion signal domain protein {ECO:0000313|EMBL:EFK63470.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_058_000M1_scaffold_273_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15308..15901
DNA (594bp) protein (198aa)
RNA polymerase ECF-type sigma factor n=6 Tax=Bacteroidales RepID=A6LCN4_PARD8
RNA polymerase ECF-type sigma factor
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN32071.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_058_000M1_scaffold_273_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15977..16150
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7X8W2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49008.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_058_000M1_scaffold_273_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16229..16879
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Ribulose-phosphate 3-epimerase n=2 Tax=Bacteroidales RepID=C7X8W3_9PORP
ribulose-phosphate 3-epimerase
L3_058_000M1_scaffold_273_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16912..18198
DNA (1287bp) protein (429aa)
Competence protein n=3 Tax=Bacteroidales RepID=A6LCN2_PARD8
competence protein
ComEC/Rec2-related protein {ECO:0000313|EMBL:EFI09253.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_058_000M1_scaffold_273_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18237..19286
DNA (1050bp) protein (350aa)
DHH subfamily 1 protein n=3 Tax=Bacteroidales RepID=D7IPB6_9BACE
DHH subfamily 1 protein {ECO:0000313|EMBL:EFI09254.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
exopolyphosphatase-like protein
L3_058_000M1_scaffold_273_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19339..19911
DNA (573bp) protein (191aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LCN0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63476.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_058_000M1_scaffold_273_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19908..21296
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:EEU51646.1}; EC=5.4.2.10 {ECO:0000313|EMBL:EEU51646.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Phosphoglucomutase n=5 Tax=Bacteroidales RepID=A6LCM9_PARD8
phosphoglucomutase
L3_058_000M1_scaffold_273_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21410..22066
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B1Z9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22073.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
regulatory protein
L3_058_000M1_scaffold_273_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22063..22815
DNA (753bp) protein (251aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X8W8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25868.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
regulatory protein
L3_058_000M1_scaffold_273_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22965..24347
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YSE9_9PORP
secreted glycosylhydrolase
Uncharacterized protein {ECO:0000313|EMBL:EKN25869.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_058_000M1_scaffold_273_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24690..25181)
DNA (492bp) protein (164aa)
NTP pyrophosphohydrolase n=4 Tax=Bacteroidales RepID=D7IPC1_9BACE
NTP pyrophosphohydrolase
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EFI09259.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_058_000M1_scaffold_273_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25185..27278)
DNA (2094bp) protein (698aa)
DNA topoisomerase III family protein {ECO:0000313|EMBL:KDS59719.1}; EC=5.99.1.2 {ECO:0000313|EMBL:KDS59719.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
DNA topoisomerase III n=2 Tax=Parabacteroides distasonis RepID=K6A211_9PORP
DNA topoisomerase
L3_058_000M1_scaffold_273_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27467..28045
DNA (579bp) protein (193aa)
RNA polymerase sigma-70 factor n=2 Tax=Bacteroidales RepID=C7X8X2_9PORP
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EEU51651.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_058_000M1_scaffold_273_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28060..29832)
DNA (1773bp) protein (591aa)
TPR-domain containing protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCM3_PARD8
hypothetical protein
TPR-domain containing protein {ECO:0000313|EMBL:ABR43437.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_273_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29886..31709)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IUH1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49021.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_058_000M1_scaffold_273_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31833..33479)
DNA (1647bp) protein (549aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCM1_PARD8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR43435.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_058_000M1_scaffold_273_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33507..36914)
DNA (3408bp) protein (1136aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroidales RepID=C7X8X6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87397.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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