ggKbase home page

L3_058_000M1_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_282_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..846
DNA (846bp) protein (282aa)
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446, ECO:0000313|EMBL:CBK65831.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Malonyl CoA-acyl carrier protein transacylase n=8 Tax=Bacteroides RepID=D6D736_9BACE
L3_058_000M1_scaffold_282_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(831..1028)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QKM1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65832.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_058_000M1_scaffold_282_3
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1048..2178
DNA (1131bp) protein (377aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=5 Tax=Bacteroides RepID=D6D738_9BACE
L3_058_000M1_scaffold_282_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2211..3071
DNA (861bp) protein (287aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AGN0_9BACE
L3_058_000M1_scaffold_282_5
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3176..3943)
DNA (768bp) protein (256aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QKM4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ04365.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_058_000M1_scaffold_282_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4080..4253
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D0TPN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86847.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_058_000M1_scaffold_282_7
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4316..4561)
DNA (246bp) protein (82aa)
RNA-binding proteins (RRM domain) n=3 Tax=Bacteroides RepID=D6D740_9BACE
RNA-binding proteins (RRM domain)
RNA-binding protein {ECO:0000313|EMBL:EFI10980.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_058_000M1_scaffold_282_8
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4970..6472)
DNA (1503bp) protein (501aa)
L-glutamine synthetase (EC:6.3.1.2)
L-glutamine synthetase n=4 Tax=Bacteroides RepID=D6D741_9BACE
Glutamate--ammonia ligase {ECO:0000313|EMBL:EFI14382.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_058_000M1_scaffold_282_9
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6540..7346)
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7LY80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN06260.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L3_058_000M1_scaffold_282_10
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7471..8184
DNA (714bp) protein (238aa)
Uncharacterised ArCR, COG2043 n=3 Tax=Bacteroides RepID=D6D742_9BACE
Uncharacterised ArCR, COG2043.
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14380.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_058_000M1_scaffold_282_11
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8453..8962
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D6D743_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN06258.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_058_000M1_scaffold_282_12
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8976..9911
DNA (936bp) protein (312aa)
Tat pathway signal sequence domain protein n=6 Tax=Bacteroides RepID=C3QH24_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI14378.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_058_000M1_scaffold_282_13
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9919..11466
DNA (1548bp) protein (516aa)
Ferredoxin-type protein n=1 Tax=Bacteroides sp. D22 RepID=D7J2M3_9BACE
Ferredoxin-type protein {ECO:0000313|EMBL:EFI14377.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
ferredoxin-type protein
L3_058_000M1_scaffold_282_14
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11706..12512
DNA (807bp) protein (269aa)
Phospholipase, patatin family n=3 Tax=Bacteroides RepID=D7J2M2_9BACE
Phospholipase, patatin family {ECO:0000313|EMBL:EFI14376.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_058_000M1_scaffold_282_15
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12503..14263
DNA (1761bp) protein (587aa)
Glycosidases n=2 Tax=Bacteroides RepID=D6D5W6_9BACE
Glycosidases
Uncharacterized protein {ECO:0000313|EMBL:EGN06254.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_058_000M1_scaffold_282_16
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14411..14899
DNA (489bp) protein (163aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QH20_9BACE
Protein of unknown function (DUF2874).
Uncharacterized protein {ECO:0000313|EMBL:EEO51254.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_058_000M1_scaffold_282_17
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14987..16999)
DNA (2013bp) protein (671aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
1,4-alpha-glucan branching enzyme n=2 Tax=Bacteroides RepID=D7J2L9_9BACE
1,4-alpha-glucan branching enzyme
L3_058_000M1_scaffold_282_18
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17018..17464)
DNA (447bp) protein (149aa)
YhcH/YjgK/YiaL family protein n=3 Tax=Bacteroides RepID=C3QH18_9BACE
Probable beta-D-galactosidase {ECO:0000313|EMBL:CDM05552.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
L3_058_000M1_scaffold_282_19
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17502..18176)
DNA (675bp) protein (225aa)
TIGR02453 family protein n=4 Tax=Bacteroides RepID=D0TPM1_9BACE
TIGR02453 family protein {ECO:0000313|EMBL:EEZ04352.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
conserved hypothetical protein TIGR02453
L3_058_000M1_scaffold_282_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18454..19050)
DNA (597bp) protein (199aa)
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase (EC:4.1.3.38)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UVQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86861.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_058_000M1_scaffold_282_21
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19034..20041)
DNA (1008bp) protein (336aa)
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:EEZ04350.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EEZ04350.1};; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
aminodeoxychorismate synthase, subunit I (EC:2.6.1.85)
Para-aminobenzoate synthase component I n=4 Tax=Bacteroides RepID=C3QH15_9BACE
L3_058_000M1_scaffold_282_22
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20169..20903)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UW14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86863.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_058_000M1_scaffold_282_23
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21037..21273)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U1Z6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72065.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_058_000M1_scaffold_282_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21422..22567
DNA (1146bp) protein (382aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E5CG64_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22149.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
integrase
L3_058_000M1_scaffold_282_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22617..23111)
DNA (495bp) protein (165aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9ICJ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22148.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_058_000M1_scaffold_282_26
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23113..24408)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8VA15_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY25907.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
Retron-type reverse transcriptase
L3_058_000M1_scaffold_282_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24841..31629)
DNA (6789bp) protein (2263aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PZC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22146.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
CotH protein.
L3_058_000M1_scaffold_282_28
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31639..32805)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I8V6Q5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ92346.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
hypothetical protein
L3_058_000M1_scaffold_282_29
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32802..33011)
DNA (210bp) protein (70aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QT92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ92347.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
L3_058_000M1_scaffold_282_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33055..35190)
DNA (2136bp) protein (712aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I8Z1J4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY63601.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
Displaying items 1-30 of 71 in total

View Taxonomy