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L3_058_000M1_scaffold_284

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_284_1
unknown

Not on your lists

1..114
DNA (114bp) protein (38aa)

This feature has no annotations

L3_058_000M1_scaffold_284_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(117..392)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5Z5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13857.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_058_000M1_scaffold_284_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

627..2183
DNA (1557bp) protein (519aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AFI0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86806.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_284_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2246..3283
DNA (1038bp) protein (346aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86805.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_284_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3322..4197
DNA (876bp) protein (292aa)
Hydrolase, carbon-nitrogen family n=4 Tax=Parabacteroides RepID=A7AFH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14512.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
beta-ureidopropionase
L3_058_000M1_scaffold_284_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4194..5195
DNA (1002bp) protein (334aa)
para-aminobenzoate synthase component I (EC:2.6.1.85)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14511.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_058_000M1_scaffold_284_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5179..5769
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AFH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86802.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_284_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5691..6437)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6A876_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14509.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_058_000M1_scaffold_284_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6471..7487)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFI5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14508.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_058_000M1_scaffold_284_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7545..9374)
DNA (1830bp) protein (610aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B577_9PORP
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDD13848.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATP-dependent DNA helicase
L3_058_000M1_scaffold_284_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9484..10764
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BHT6_9PORP
DEAD/DEAH box helicase {ECO:0000313|EMBL:CDD13847.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATP-dependent RNA helicase DeaD
L3_058_000M1_scaffold_284_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10838..12247
DNA (1410bp) protein (470aa)
Tat pathway signal sequence domain protein n=4 Tax=Parabacteroides RepID=A7AFH0_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD13846.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Gfo/Idh/MocA family oxidoreductase
L3_058_000M1_scaffold_284_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12892..14823)
DNA (1932bp) protein (644aa)
nadE; NAD synthetase (EC:6.3.1.5)
NAD+ synthetase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A881_9PORP
NAD+ synthetase {ECO:0000313|EMBL:EKN14504.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_058_000M1_scaffold_284_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14946..15209)
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AFG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14230.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_058_000M1_scaffold_284_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15342..17528)
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14502.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glutamine synthetase
L3_058_000M1_scaffold_284_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17596..18825)
DNA (1230bp) protein (410aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
LL-diaminopimelate aminotransferase n=3 Tax=Parabacteroides merdae RepID=A7AFG3_9PORP
L,L-diaminopimelate aminotransferase
L3_058_000M1_scaffold_284_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18852..19676)
DNA (825bp) protein (275aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Diaminopimelate epimerase n=3 Tax=Parabacteroides merdae RepID=A7AFG2_9PORP
dapF; diaminopimelate epimerase
L3_058_000M1_scaffold_284_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20119..21759)
DNA (1641bp) protein (547aa)
Bacterial alpha-L-rhamnosidase n=3 Tax=Parabacteroides RepID=A7AFG1_9PORP
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:EDN86787.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L3_058_000M1_scaffold_284_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21943..25527)
DNA (3585bp) protein (1195aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFH5_9PORP
beta-galactosidase
L3_058_000M1_scaffold_284_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25599..25937
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL31_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14497.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
cupin
L3_058_000M1_scaffold_284_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26231..27010
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13243.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_058_000M1_scaffold_284_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27139..29094
DNA (1956bp) protein (652aa)
Fibrobacter succinogene major paralogous domain protein n=2 Tax=Parabacteroides merdae RepID=A7AFF6_9PORP
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EDN86782.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_284_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29198..30862)
DNA (1665bp) protein (555aa)
Asparagine synthetase n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6A892_9PORP
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EKN14494.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
asnB; asparagine synthetase B
L3_058_000M1_scaffold_284_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30889..32322)
DNA (1434bp) protein (478aa)
Pyridine nucleotide-disulfide oxidoreductase n=3 Tax=Parabacteroides merdae RepID=A7AFF2_9PORP
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:EKN14493.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
glutamate synthase, small subunit
L3_058_000M1_scaffold_284_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32464..36987)
DNA (4524bp) protein (1508aa)
Class II glutamine amidotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUR7_9PORP
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDD15048.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glutamate synthase, large subunit
L3_058_000M1_scaffold_284_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37333..38877)
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7K0_9PORP
two-component system sensor histidine kinase
L3_058_000M1_scaffold_284_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39144..44003
DNA (4860bp) protein (1620aa)
ATP-dependent DNA helicase, RecQ family n=3 Tax=Parabacteroides RepID=A7AFE8_9PORP
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:EDN86774.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_058_000M1_scaffold_284_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44018..44536
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZSC9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14426.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
acetyltransferase
L3_058_000M1_scaffold_284_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44807..46699
DNA (1893bp) protein (631aa)
Class II glutamine amidotransferase n=2 Tax=Parabacteroides merdae RepID=A7AFE5_9PORP
Class II glutamine amidotransferase {ECO:0000313|EMBL:EDN86771.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
amidophosphoribosyltransferase
L3_058_000M1_scaffold_284_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46737..47867
DNA (1131bp) protein (377aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7K3_9PORP
Displaying items 1-30 of 45 in total

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