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L3_058_000M1_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_290_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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59..295
DNA (237bp) protein (79aa)
Acyl carrier protein n=34 Tax=Bacteroides RepID=ACP_BACTN
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_058_000M1_scaffold_290_2
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

317..1582
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=6 Tax=Bacteroides RepID=A7V0A8_BACUN
L3_058_000M1_scaffold_290_3
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1590..2468
DNA (879bp) protein (293aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=3 Tax=Bacteroides RepID=D2EWK1_9BACE
L3_058_000M1_scaffold_290_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2427..3437)
DNA (1011bp) protein (337aa)
6-phosphofructokinase {ECO:0000313|EMBL:EFA20038.1}; EC=2.7.1.11 {ECO:0000313|EMBL:EFA20038.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=7 Tax=Bacteroides RepID=D2EWK2_9BACE
L3_058_000M1_scaffold_290_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3560..5071
DNA (1512bp) protein (504aa)
GH3 auxin-responsive promoter n=2 Tax=Bacteroides RepID=A7V0B2_BACUN
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EDO55325.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
GH3 auxin-responsive promoter
L3_058_000M1_scaffold_290_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5217..6098)
DNA (882bp) protein (294aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V0B3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75157.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_058_000M1_scaffold_290_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6198..7289)
DNA (1092bp) protein (364aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Bacteroides uniformis RepID=R9ICN7_BACUN
L3_058_000M1_scaffold_290_8
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7376..8851
DNA (1476bp) protein (492aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=3 Tax=Bacteroides RepID=D2EWK6_9BACE
L3_058_000M1_scaffold_290_9
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9010..11040)
DNA (2031bp) protein (677aa)
Phospholipase patatin family n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EFM6_9BACE
Phospholipase patatin family {ECO:0000313|EMBL:CDE01093.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
putative esterase of the alpha-beta hydrolase superfamily
L3_058_000M1_scaffold_290_10
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11186..12730)
DNA (1545bp) protein (515aa)
Sulfatase n=2 Tax=Bacteroides RepID=R7EEG1_9BACE
Sulfatase {ECO:0000313|EMBL:CDE01095.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
sulfatase
L3_058_000M1_scaffold_290_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12727..13926)
DNA (1200bp) protein (400aa)
Glycosyl hydrolase, family 88 n=4 Tax=Bacteroides RepID=D2EWK9_9BACE
Glycosyl Hydrolase Family 88 family protein {ECO:0000313|EMBL:KDS52403.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
glycosyl hydrolase 88
L3_058_000M1_scaffold_290_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14105..14548
DNA (444bp) protein (148aa)
Phenylacetic acid degradation protein PaaD n=6 Tax=Bacteroides RepID=I9IWH1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS53479.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
putative phenylacetic acid degradation protein
L3_058_000M1_scaffold_290_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14493..15365)
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZHZ1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS11126.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_058_000M1_scaffold_290_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15322..17277)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=6 Tax=root RepID=A7V0C3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75149.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_058_000M1_scaffold_290_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17586..18761
DNA (1176bp) protein (392aa)
Efflux transporter, RND family, MFP subunit n=7 Tax=root RepID=D2EWL3_9BACE
Efflux transporter {ECO:0000313|EMBL:EFV27624.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
efflux transporter, RND family, MFP subunit
L3_058_000M1_scaffold_290_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18816..22235
DNA (3420bp) protein (1140aa)
RND transporter HAE1 family n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EEH0_9BACE
RND transporter HAE1 family {ECO:0000313|EMBL:CDE01105.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
acriflavin resistance protein
L3_058_000M1_scaffold_290_17
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22255..23640
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EFF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE01106.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
RND efflux system, outer membrane lipoprotein, NodT family
L3_058_000M1_scaffold_290_18
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23740..24507
DNA (768bp) protein (256aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V659_9BACE
L3_058_000M1_scaffold_290_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25071..25805)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V0D0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO55343.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_058_000M1_scaffold_290_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25796..26878)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=3 Tax=Bacteroides uniformis RepID=I8ZSU1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75143.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
aminoglycoside phosphotransferase
L3_058_000M1_scaffold_290_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27068..31069
DNA (4002bp) protein (1334aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZJG4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75142.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
histidine kinase
L3_058_000M1_scaffold_290_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31199..32758
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I4G2_BACUN
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:KDS53491.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
sulfatase
L3_058_000M1_scaffold_290_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32929..34719
DNA (1791bp) protein (597aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides uniformis RepID=A7V0D7_BACUN
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY75140.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
TonB-dependent receptor plug
L3_058_000M1_scaffold_290_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34716..35921
DNA (1206bp) protein (402aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EFG2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY75140.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
TonB-dependent receptor plug
L3_058_000M1_scaffold_290_25
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35921..37438
DNA (1518bp) protein (506aa)
SusD family protein n=4 Tax=Bacteroides RepID=A7V0D8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01117.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
RagB/SusD domain protein
L3_058_000M1_scaffold_290_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37844..40489)
DNA (2646bp) protein (882aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V0D9_BACUN
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDO55352.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
putative beta-galactosidase
L3_058_000M1_scaffold_290_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40498..42870)
DNA (2373bp) protein (791aa)
Polysaccharide lyase family 8, super-sandwich domain protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V0E0_BACUN
Polysaccharide lyase family 8, super-sandwich domain protein {ECO:0000313|EMBL:EDO55353.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
polysaccharide lyase family protein 8
L3_058_000M1_scaffold_290_28
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43065..44198
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A7V0E2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV27636.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
glycosyl hydrolase family 43
L3_058_000M1_scaffold_290_29
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44201..45169
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
tRNA-dihydrouridine synthase n=2 Tax=Bacteroides RepID=A7V0E3_BACUN
tRNA-U20a,U20b-dihydrouridine synthase
L3_058_000M1_scaffold_290_30
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45378..48461)
DNA (3084bp) protein (1028aa)
Chondroitin sulfate ABC lyase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EHY7_9BACE
Chondroitin sulfate ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC eliminase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitin ABC lyase {ECO:0000256|PIRNR:PIRNR034515}; Chondroitinase ABC {ECO:0000256|PIRNR:PIRNR034515}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Lyase catalytic
Displaying items 1-30 of 79 in total

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