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L3_058_000M1_scaffold_323

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Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_323_1
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

124..408
DNA (285bp) protein (95aa)
Transcriptional regulator n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJC7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY89819.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_058_000M1_scaffold_323_2

Not on your lists

408..587
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1UC54_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC69056.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_058_000M1_scaffold_323_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(680..1492)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89822.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_058_000M1_scaffold_323_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1718..2596
DNA (879bp) protein (293aa)
Radical SAM domain protein n=2 Tax=root RepID=R5MJD4_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCY89824.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
radical SAM protein
L3_058_000M1_scaffold_323_5
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2700..3185
DNA (486bp) protein (162aa)
Large-conductance mechanosensitive channel n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MWU9_9FIRM
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
large conductance mechanosensitive channel protein
L3_058_000M1_scaffold_323_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3182..3979
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Pyrroline-5-carboxylate reductase putative n=1 Tax=Eubacterium sp. CAG:180 RepID=R5ME63_9FIRM
pyrroline-5-carboxylate reductase
L3_058_000M1_scaffold_323_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4247..5290
DNA (1044bp) protein (348aa)
Heat-inducible transcription repressor hrcA n=2 Tax=root RepID=R5MDQ2_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
heat-inducible transcription repressor HrcA
L3_058_000M1_scaffold_323_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5348..5893
DNA (546bp) protein (182aa)
Protein GrpE n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MWV3_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
heat shock protein GrpE
L3_058_000M1_scaffold_323_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5924..7786
DNA (1863bp) protein (621aa)
Chaperone protein DnaK n=2 Tax=root RepID=R5MXV6_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
dnaK; Chaperone protein DnaK
L3_058_000M1_scaffold_323_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7897..9054
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=2 Tax=root RepID=R5ME66_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
chaperone protein DnaJ
L3_058_000M1_scaffold_323_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9136..9579
DNA (444bp) protein (148aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJE5_9FIRM
L3_058_000M1_scaffold_323_12
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9595..10530
DNA (936bp) protein (312aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXW1_9FIRM
L3_058_000M1_scaffold_323_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10761..11288
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=root RepID=R5ME71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89838.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_058_000M1_scaffold_323_14
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11305..12399
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=3 Tax=root RepID=R5MDR3_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ychF; GTP-binding protein YchF
L3_058_000M1_scaffold_323_15
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12759..14489)
DNA (1731bp) protein (577aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FSY3_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDE18409.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_323_16
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14493..16262)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CBW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA74113.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000M1_scaffold_323_17
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16411..17025)
DNA (615bp) protein (205aa)
Transcriptional regulator TetR family n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H489_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDE34499.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
transcriptional regulator, TetR family
L3_058_000M1_scaffold_323_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17104..17409
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89842.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Protein of unknown function (DUF3343).
L3_058_000M1_scaffold_323_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17406..18554
DNA (1149bp) protein (383aa)
Cysteine desulfurase family protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5ME74_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:CCY89843.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
cysteine desulfurase family protein
L3_058_000M1_scaffold_323_20
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18668..19564
DNA (897bp) protein (299aa)
TIGR00159 family protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJF6_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:CCY89844.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_058_000M1_scaffold_323_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19551..20855
DNA (1305bp) protein (435aa)
YbbR-like protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDR8_9FIRM
YbbR-like protein {ECO:0000313|EMBL:CCY89845.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_058_000M1_scaffold_323_22
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20874..22211
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MWW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89846.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_058_000M1_scaffold_323_23
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22224..22931
DNA (708bp) protein (236aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=root RepID=R5MXX0_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY89847.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_058_000M1_scaffold_323_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22956..24374
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
GHKL domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5ME79_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_058_000M1_scaffold_323_25
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24389..25363
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89849.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Predicted metal-dependent enzyme
L3_058_000M1_scaffold_323_26
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25360..26196
DNA (837bp) protein (279aa)
Protein-(Glutamine-N5) methyltransferase release factor-specific n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MDS4_9FIRM
Protein-(Glutamine-N5) methyltransferase release factor-specific {ECO:0000313|EMBL:CCY89850.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_058_000M1_scaffold_323_27
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26226..26900
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MWX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89851.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Zn-dependent proteases
L3_058_000M1_scaffold_323_28
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26912..27652
DNA (741bp) protein (247aa)
ScpA/B protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXX5_9FIRM
ScpA/B protein {ECO:0000313|EMBL:CCY89852.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
condensin subunit ScpA
L3_058_000M1_scaffold_323_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27656..28243
DNA (588bp) protein (196aa)
Segregation and condensation protein B n=1 Tax=Eubacterium sp. CAG:180 RepID=R5ME83_9FIRM
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
segregation and condensation protein B
L3_058_000M1_scaffold_323_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28332..29048
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=root RepID=R5MJG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY89854.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy