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L3_058_000M1_scaffold_326

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_326_1
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..691)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AUE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86906.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
collagen, type I/II/III/V/XI, alpha
L3_058_000M1_scaffold_326_2
unknown

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comp(691..990)
DNA (300bp) protein (100aa)

This feature has no annotations

L3_058_000M1_scaffold_326_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1597..2742)
DNA (1146bp) protein (382aa)
RNA-directed DNA polymerase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQH7_9CLOT
RNA-directed DNA polymerase {ECO:0000313|EMBL:CCY69020.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
reverse transcriptase
L3_058_000M1_scaffold_326_4
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2756..3424)
DNA (669bp) protein (223aa)
Thiamine biosynthesis protein ThiF n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQI0_9CLOT
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:CCY69025.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
thiamine biosynthesis protein ThiF
L3_058_000M1_scaffold_326_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3439..4254)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L7U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY69027.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L3_058_000M1_scaffold_326_6
unknown

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comp(4256..5539)
DNA (1284bp) protein (428aa)

This feature has no annotations

L3_058_000M1_scaffold_326_7
unknown

Not on your lists

comp(5892..6125)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_058_000M1_scaffold_326_8
unknown

Not on your lists

comp(6143..6529)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_058_000M1_scaffold_326_9
unknown

Not on your lists

comp(6954..7073)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_058_000M1_scaffold_326_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7273..8424)
DNA (1152bp) protein (384aa)
Probable transposase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP8_EUBR3
putative transposase
Probable transposase {ECO:0000313|EMBL:ACR74845.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_326_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8384..8581)
DNA (198bp) protein (66aa)
DNA invertase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGP7_EUBR3
DNA invertase
DNA invertase {ECO:0000313|EMBL:ACR74844.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_058_000M1_scaffold_326_12
unknown

Not on your lists

comp(8822..9079)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_058_000M1_scaffold_326_13
unknown

Not on your lists

comp(9114..9299)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_058_000M1_scaffold_326_14
unknown

Not on your lists

comp(9446..9886)
DNA (441bp) protein (147aa)

This feature has no annotations

L3_058_000M1_scaffold_326_15
unknown

Not on your lists

comp(9999..10202)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_058_000M1_scaffold_326_16
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10362..10736)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Streptococcus sobrinus RepID=UPI0003131F22
Uncharacterized protein {ECO:0000313|EMBL:ERL09821.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
hypothetical protein
L3_058_000M1_scaffold_326_17
unknown

Not on your lists

comp(10824..11699)
DNA (876bp) protein (292aa)

This feature has no annotations

L3_058_000M1_scaffold_326_18
unknown

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11968..12414
DNA (447bp) protein (149aa)

This feature has no annotations

L3_058_000M1_scaffold_326_19
unknown

Not on your lists

comp(12558..13691)
DNA (1134bp) protein (378aa)

This feature has no annotations

L3_058_000M1_scaffold_326_20

Not on your lists

14227..15063
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BV07_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75652.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
integrase family protein
L3_058_000M1_scaffold_326_21
Bacillus sp. TH008, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15499..16860
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Bacillus subtilis RepID=UPI000349A048
SPBc2 prophage-derived protein YonV
Uncharacterized protein {ECO:0000313|EMBL:KKB71986.1}; TaxID=1609979 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TH008.;"
L3_058_000M1_scaffold_326_22
unknown

Not on your lists

16875..17141
DNA (267bp) protein (89aa)

This feature has no annotations

L3_058_000M1_scaffold_326_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17128..19908
DNA (2781bp) protein (927aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71863.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_058_000M1_scaffold_326_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20318..21379
DNA (1062bp) protein (354aa)
Calcineurin-like phosphoesterase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KC54_9FIRM
Calcineurin-like phosphoesterase.
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:CBL02417.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_058_000M1_scaffold_326_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21392..21718
DNA (327bp) protein (109aa)
Integrase/recombinase n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AAZ6_CLOBO
integrase/recombinase
Integrase/recombinase {ECO:0000313|EMBL:AEB77313.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT015925.;"
L3_058_000M1_scaffold_326_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21729..22736
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7K1X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42960.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Site-specific recombinase XerD
L3_058_000M1_scaffold_326_27
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22764..23048
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=K9D3Y7_9FIRM
DNA-binding protein {ECO:0000313|EMBL:KGF48203.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis DNF00314.;"
histone family protein DNA-binding protein
L3_058_000M1_scaffold_326_28

Not on your lists

23053..24153
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BV01_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75646.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
yonG; hypothetical protein
L3_058_000M1_scaffold_326_29

Not on your lists

24128..25966
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BV00_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75645.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
yonF; prophage terminase, ATP subunit; phage SPbeta
L3_058_000M1_scaffold_326_30

Not on your lists

25984..27501
DNA (1518bp) protein (506aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUZ9_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75644.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
phage protein
Displaying items 1-30 of 66 in total

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