ggKbase home page

L3_058_000M1_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_366_1
unknown

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)

This feature has no annotations

L3_058_000M1_scaffold_366_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(330..698)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D4JKT1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89483.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(677..994)
DNA (318bp) protein (106aa)
Helix-turn-helix n=2 Tax=Eubacterium rectale RepID=D4JKT2_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK89482.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1020..1520)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D4JKT3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89481.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_5
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1589..1921)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5K036_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54422.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
hypothetical protein
L3_058_000M1_scaffold_366_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2292..3527)
DNA (1236bp) protein (412aa)
AIPR protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E240_9FIRM
AIPR protein.
AIPR protein {ECO:0000313|EMBL:CBK89480.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3736..4338)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E239_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89479.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4355..5212)
DNA (858bp) protein (286aa)
DpnII restriction endonuclease. (EC:3.1.21.4)
DpnII restriction endonuclease {ECO:0000313|EMBL:CBK89478.1}; EC=3.1.21.4 {ECO:0000313|EMBL:CBK89478.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DpnII restriction endonuclease n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E238_9FIRM
L3_058_000M1_scaffold_366_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5216..6061)
DNA (846bp) protein (282aa)
Restriction endonuclease n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E237_9FIRM
Restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:CBK89477.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6045..6857)
DNA (813bp) protein (271aa)
DNA modification methylase (EC:2.1.1.72)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA modification methylase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E236_9FIRM
L3_058_000M1_scaffold_366_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6879..7496)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E235_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89475.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7509..8342)
DNA (834bp) protein (278aa)
DNA adenine methylase (dam) (EC:2.1.1.72)
DNA adenine methylase (Dam) {ECO:0000313|EMBL:CBK89474.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK89474.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA adenine methylase (Dam) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E234_9FIRM
L3_058_000M1_scaffold_366_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8448..8996)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46748.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Putative RNA methylase family UPF0020.
L3_058_000M1_scaffold_366_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9318..9551
DNA (234bp) protein (78aa)
Helix-turn-helix n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E232_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK89472.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9555..10076
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E231_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89471.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10219..10461
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E230_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89470.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10631..11503)
DNA (873bp) protein (291aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:CEO33249.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CEO33249.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_058_000M1_scaffold_366_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11517..11972)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E229_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89469.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_19
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11941..12474)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6V7_9FIRM
V8-like Glu-specific endopeptidase {ECO:0000313|EMBL:CEO33248.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_058_000M1_scaffold_366_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12446..15538)
DNA (3093bp) protein (1031aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24298.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_058_000M1_scaffold_366_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15621..16298)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E227_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89467.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_22
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16300..16740)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7INT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52968.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_058_000M1_scaffold_366_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16691..17143)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E225_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89465.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_24
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17350..18924)
DNA (1575bp) protein (525aa)
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TH41_9FIRM
L3_058_000M1_scaffold_366_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19205..19792
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKU3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94240.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_058_000M1_scaffold_366_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19935..20207
DNA (273bp) protein (91aa)
Stage III sporulation protein D n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TI09_9FIRM
Stage III sporulation protein D {ECO:0000313|EMBL:CDC71885.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
stage III sporulation protein D
L3_058_000M1_scaffold_366_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20352..21503)
DNA (1152bp) protein (384aa)
Endoglucanase (EC:3.2.1.4)
Endoglucanase {ECO:0000313|EMBL:CBK94241.1}; EC=3.2.1.4 {ECO:0000313|EMBL:CBK94241.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Endoglucanase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKU4_9FIRM
L3_058_000M1_scaffold_366_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21525..24107)
DNA (2583bp) protein (861aa)
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CBK94242.1}; EC=3.6.3.4 {ECO:0000313|EMBL:CBK94242.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKU5_9FIRM
L3_058_000M1_scaffold_366_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24163..24540)
DNA (378bp) protein (126aa)
Heavy-metal-associated domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E220_9FIRM
Heavy-metal-associated domain.
Heavy-metal-associated domain {ECO:0000313|EMBL:CBK89460.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_058_000M1_scaffold_366_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24565..24876)
DNA (312bp) protein (104aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E219_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK89459.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Displaying items 1-30 of 87 in total

View Taxonomy