ggKbase home page

L3_058_000M1_scaffold_754

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_754_1
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(131..1978)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7V1J2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFV26401.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_058_000M1_scaffold_754_2
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2000..5209)
DNA (3210bp) protein (1070aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=root RepID=A7V1J3_BACUN
TonB-dependent Receptor Plug domain-containing protein {ECO:0000313|EMBL:EFV26402.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_058_000M1_scaffold_754_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5716..5925
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V1J4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO54910.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L3_058_000M1_scaffold_754_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6025..7221)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2ETB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA21195.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_058_000M1_scaffold_754_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7510..8199
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=4 Tax=Bacteroides RepID=D2ETB7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77879.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
two component transcriptional regulator, winged helix family
L3_058_000M1_scaffold_754_6
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8174..9967
DNA (1794bp) protein (598aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Bacteroides RepID=D2ETB6_9BACE
integral membrane sensor signal transduction histidine kinase
L3_058_000M1_scaffold_754_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10769..12142
DNA (1374bp) protein (458aa)
tyrosine phenol-lyase (EC:4.1.99.1 4.1.99.2)
Beta-eliminating lyase n=5 Tax=Bacteroides RepID=A7V1K0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77881.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_058_000M1_scaffold_754_8
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12148..12777)
DNA (630bp) protein (210aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7V1K1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01959.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
siderophore (surfactin) biosynthesis regulatory protein
L3_058_000M1_scaffold_754_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12807..14156)
DNA (1350bp) protein (450aa)
Gliding motility-associated protein GldE n=6 Tax=Bacteroides RepID=A7V1K2_BACUN
Gliding motility-associated protein GldE {ECO:0000313|EMBL:EIY77883.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
gliding motility-associated protein GldE
L3_058_000M1_scaffold_754_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14180..14635)
DNA (456bp) protein (152aa)
Single-stranded DNA-binding protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HVB5_BACUN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
single-strand binding protein
L3_058_000M1_scaffold_754_11
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14708..15793)
DNA (1086bp) protein (362aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=4 Tax=Bacteroides RepID=R7EGB2_9BACE
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDE01954.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_058_000M1_scaffold_754_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15906..16181
DNA (276bp) protein (92aa)
DNA-binding protein HU n=7 Tax=Bacteroides RepID=A7V1K5_BACUN
Bacterial DNA-binding family protein {ECO:0000313|EMBL:KDS51627.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
histone family protein DNA-binding protein
L3_058_000M1_scaffold_754_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16218..16388
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=E1WTE6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW22100.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_058_000M1_scaffold_754_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16330..17904
DNA (1575bp) protein (525aa)
S1 RNA binding domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2ETA9_9BACE
S1 RNA binding domain protein {ECO:0000313|EMBL:EFA21186.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
ribonuclease, Rne/Rng family
L3_058_000M1_scaffold_754_15
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17985..18752)
DNA (768bp) protein (256aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9X4_9BACE
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EFV26413.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
iron-containing alcohol dehydrogenase
L3_058_000M1_scaffold_754_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18743..19093)
DNA (351bp) protein (117aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9X4_9BACE
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EFV26413.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
iron-containing alcohol dehydrogenase
L3_058_000M1_scaffold_754_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19102..20034)
DNA (933bp) protein (311aa)
PAP2 superfamily protein n=3 Tax=Bacteroides RepID=E5V9X5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS07766.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
phosphoesterase PA-phosphatase related protein
L3_058_000M1_scaffold_754_18
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20031..20684)
DNA (654bp) protein (218aa)
CDP-alcohol phosphatidyltransferase n=5 Tax=Bacteroides RepID=A7V1K9_BACUN
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CDE01949.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
CDP-alcohol phosphatidyltransferase
L3_058_000M1_scaffold_754_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20674..21201)
DNA (528bp) protein (176aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V1L0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY77891.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_058_000M1_scaffold_754_20
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21186..21752)
DNA (567bp) protein (189aa)
phosphatidylglycerophosphatase (EC:3.1.3.27)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7EKD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE01947.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_058_000M1_scaffold_754_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21798..23087)
DNA (1290bp) protein (430aa)
inositol-3-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase n=3 Tax=Bacteroides uniformis RepID=R9HUS4_BACUN
Myo-inositol-1-phosphate synthase family protein {ECO:0000313|EMBL:KDS51620.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_058_000M1_scaffold_754_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23195..25732)
DNA (2538bp) protein (846aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5V9Y0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV26419.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_058_000M1_scaffold_754_23
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25921..27615
DNA (1695bp) protein (565aa)
Aspartate-alanine antiporter n=1 Tax=Bacteroides sp. D20 RepID=D2ETA1_9BACE
Aspartate-alanine antiporter {ECO:0000313|EMBL:EFA21178.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
putative transport protein
L3_058_000M1_scaffold_754_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27892..29526
DNA (1635bp) protein (545aa)
Aspartate 4-decarboxylase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HV04_BACUN
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EOS07759.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
putative aspartate decarboxylase
L3_058_000M1_scaffold_754_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29560..30873)
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HUU1_BACUN
multi-sensor signal transduction histidine kinase
L3_058_000M1_scaffold_754_26
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30864..32225)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZCU1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01939.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Fis family transcriptional regulator
L3_058_000M1_scaffold_754_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32369..33856)
DNA (1488bp) protein (496aa)
Outer membrane efflux protein n=6 Tax=Bacteroides RepID=A7V1L9_BACUN
Outer membrane efflux family protein {ECO:0000313|EMBL:KDS51614.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
outer membrane efflux protein
L3_058_000M1_scaffold_754_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34050..34562
DNA (513bp) protein (171aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase n=7 Tax=Bacteroides RepID=A7V1M0_BACUN
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EOS07755.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L3_058_000M1_scaffold_754_29
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34621..36174
DNA (1554bp) protein (518aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.41 6.4.1.3)
Carboxyl transferase domain protein n=8 Tax=root RepID=A7V1M1_BACUN
Carboxyl transferase domain protein {ECO:0000313|EMBL:EFA21172.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L3_058_000M1_scaffold_754_30
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36206..37138
DNA (933bp) protein (311aa)
Uncharacterized protein n=6 Tax=root RepID=A7V1M2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA21171.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy