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L3_058_000M1_scaffold_776

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_776_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..346)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KWL9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS26417.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_058_000M1_scaffold_776_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(523..2301)
DNA (1779bp) protein (593aa)
Alpha-1,3-galactosidase B n=2 Tax=Bacteroides vulgatus RepID=GLAB1_BACV8
ATP/GTP-binding site
Putative alpha-1,3-galactosidase B {ECO:0000313|EMBL:EFG17753.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_058_000M1_scaffold_776_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2662..4212)
DNA (1551bp) protein (517aa)
Glycosyl hydrolase {ECO:0000313|EMBL:KDS26467.1}; EC=3.2.1.- {ECO:0000313|EMBL:KDS26467.1};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Glycosyl hydrolase family 109 protein 4 n=2 Tax=Bacteroides vulgatus RepID=G1094_BACV8
oxidoreductase
L3_058_000M1_scaffold_776_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4252..4443
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS26392.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_058_000M1_scaffold_776_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4440..6251)
DNA (1812bp) protein (604aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroides vulgatus RepID=A6KWM2_BACV8
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS26439.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_058_000M1_scaffold_776_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6269..9670)
DNA (3402bp) protein (1134aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IAM6_9BACE
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37837.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_058_000M1_scaffold_776_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9799..10773)
DNA (975bp) protein (325aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides vulgatus RepID=D4V8U4_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR37838.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_8
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10902..11498)
DNA (597bp) protein (199aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroides RepID=A6KWM5_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS14281.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_058_000M1_scaffold_776_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11710..13818)
DNA (2109bp) protein (703aa)
Thioredoxin n=2 Tax=Bacteroides vulgatus RepID=D4V8U6_BACVU
AhpC/TSA family protein {ECO:0000313|EMBL:KDS26446.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
thiol:disulfide interchange protein DsbE
L3_058_000M1_scaffold_776_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13841..15031)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3M9_9BACE
AhpC/TSA family protein {ECO:0000313|EMBL:KDS26464.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
thiol:disulfide interchange protein
L3_058_000M1_scaffold_776_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15132..16406)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=3 Tax=root RepID=I9U6S1_BACVU
TPR repeat family protein {ECO:0000313|EMBL:KDS26457.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_058_000M1_scaffold_776_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16417..18303)
DNA (1887bp) protein (629aa)
TonB-dependent receptor n=2 Tax=Bacteroides RepID=C6Z360_9BACE
TonB family C-terminal domain protein {ECO:0000313|EMBL:KDS26394.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_058_000M1_scaffold_776_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18337..18720)
DNA (384bp) protein (128aa)
Transcriptional regulator, BlaI/MecI/CopY family n=15 Tax=Bacteroides RepID=C6Z361_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04101.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transcriptional regulator
L3_058_000M1_scaffold_776_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18910..19101)
DNA (192bp) protein (64aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=C6Z362_9BACE
Glycosyl Hydrolase Family 88 family protein {ECO:0000313|EMBL:KDS26474.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
L3_058_000M1_scaffold_776_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19118..20104)
DNA (987bp) protein (329aa)
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase n=2 Tax=Bacteroides vulgatus RepID=A6KWN1_BACV8
delta\-4\,5\ unsaturated\ glucuronyl\ hydrolase
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:ABR37845.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20122..21771)
DNA (1650bp) protein (550aa)
Glycoside hydrolase family 43, candidate beta-xylosidase/alpha-L-arabinofuranosidase n=5 Tax=Bacteroides RepID=A6KWN2_BACV8
beta-xylosidase/alpha-L-arabinofuranosidase
Glycoside hydrolase family 43 candidate beta-xylosidase/alpha-L-arabinofuranosidase {ECO:0000313|EMBL:CDF18937.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_058_000M1_scaffold_776_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21925..23862)
DNA (1938bp) protein (646aa)
Glycoside hydrolase family 97 n=2 Tax=Bacteroides vulgatus RepID=A6KWN3_BACV8
glycoside hydrolase
Glycoside hydrolase family 97 {ECO:0000313|EMBL:ABR37847.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24004..26640)
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HSB8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04105.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_058_000M1_scaffold_776_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26647..27732)
DNA (1086bp) protein (362aa)
Beta-lactamase n=2 Tax=Bacteroides vulgatus RepID=D4V8V5_BACVU
beta-lactamase class C
Putative beta-lactamase class C {ECO:0000313|EMBL:ABR37849.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27846..29732)
DNA (1887bp) protein (629aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z367_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS26400.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_058_000M1_scaffold_776_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29859..31244)
DNA (1386bp) protein (462aa)
Glycoside hydrolase family 28 n=2 Tax=Bacteroides vulgatus RepID=A6KWN7_BACV8
glycoside hydrolase
Glycoside hydrolase family 28 {ECO:0000313|EMBL:ABR37851.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31340..32359)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HSC6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS26459.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_058_000M1_scaffold_776_23
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32410..32892)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z369_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV66069.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_058_000M1_scaffold_776_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33069..34001)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HK16_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS26381.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_058_000M1_scaffold_776_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34192..35628)
DNA (1437bp) protein (479aa)
Glycoside hydrolase family 28 n=2 Tax=Bacteroides vulgatus RepID=A6KWP0_BACV8
glycoside hydrolase
Glycoside hydrolase family 28 {ECO:0000313|EMBL:ABR37854.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35828..37855)
DNA (2028bp) protein (676aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroides vulgatus RepID=A6KWP1_BACV8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR37855.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_058_000M1_scaffold_776_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37878..41204)
DNA (3327bp) protein (1109aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z379_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET15338.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_058_000M1_scaffold_776_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41248..41763)
DNA (516bp) protein (172aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=A6KWP3_BACV8
RNA polymerase ECF-type sigma factor
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS04115.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_058_000M1_scaffold_776_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41964..44777)
DNA (2814bp) protein (938aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroides RepID=D4V8W4_BACVU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFG17777.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
transcriptional regulator
L3_058_000M1_scaffold_776_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44936..47674)
DNA (2739bp) protein (913aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9U6Q3_BACVU
Heparinase II/III-like protein {ECO:0000313|EMBL:EFG17779.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
Displaying items 1-30 of 55 in total

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