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L3_058_000M1_scaffold_1800

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_1800_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..790
DNA (789bp) protein (263aa)
Putative phage head-tail adaptor n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U731_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04303.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_1800_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(960..1757)
DNA (798bp) protein (266aa)
GDSL-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA92_9FIRM
Carbohydrate Esterase Family 2 protein
Carbohydrate Esterase Family 2 protein {ECO:0000313|EMBL:CCO04300.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_1800_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2199..2375)
DNA (177bp) protein (59aa)
GDSL-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA92_9FIRM
Carbohydrate Esterase Family 2 protein
Carbohydrate Esterase Family 2 protein {ECO:0000313|EMBL:CCO04300.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_1800_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2518..4476)
DNA (1959bp) protein (653aa)
pulA; pullulanase, type I (Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein) (EC:3.2.1.41)
Pullulanase type I n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T336_9FIRM
Pullulanase type I {ECO:0000313|EMBL:CDC66600.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_058_000M1_scaffold_1800_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4520..5392)
DNA (873bp) protein (291aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350, ECO:0000313|EMBL:CCO04298.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Phosphatidylserine decarboxylase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFF7_9FIRM
L3_058_000M1_scaffold_1800_6
unknown

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comp(5379..5483)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_058_000M1_scaffold_1800_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5500..6129)
DNA (630bp) protein (210aa)
pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-alcohol phosphatidyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U734_9FIRM
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CDC66602.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_058_000M1_scaffold_1800_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6144..7235)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66603.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical membrane protein
L3_058_000M1_scaffold_1800_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7295..8257)
DNA (963bp) protein (321aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TA98_9FIRM
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:CDC66604.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L3_058_000M1_scaffold_1800_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8463..9437
DNA (975bp) protein (325aa)
birA; Bifunctional protein birA (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T341_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_058_000M1_scaffold_1800_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9754..10230
DNA (477bp) protein (159aa)
putative iron hydrogenase, NADH dehydrogenase (EC:1.18.1.-)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFG0_9FIRM
NADH dehydrogenase (Ubiquinone) 24 kDa subunit {ECO:0000313|EMBL:CDC66606.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_058_000M1_scaffold_1800_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10232..12124
DNA (1893bp) protein (631aa)
putative iron hydrogenase, electron-transfer subunit (EC:1.6.5.3)
NADH dehydrogenase (Quinone) n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U737_9FIRM
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:CDC66607.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_058_000M1_scaffold_1800_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12148..13812
DNA (1665bp) protein (555aa)
Iron hydrogenase I (EC:1.12.7.2)
Iron hydrogenase I {ECO:0000313|EMBL:CCO04291.1}; EC=1.12.7.2 {ECO:0000313|EMBL:CCO04291.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Hydrogenase Fe-only n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZK6_9FIRM
L3_058_000M1_scaffold_1800_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14034..15188)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAA3_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO04290.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_1800_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15246..15824)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T344_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66610.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_058_000M1_scaffold_1800_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15851..16789)
DNA (939bp) protein (313aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ilvB; K01652 acetolactate synthase I/II/III large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TFG6_9FIRM
Displaying 16 items

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