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L3_058_000M1_scaffold_4310

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_4310_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(317..1270)
DNA (954bp) protein (318aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CBZ7_9FIRM
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCO04637.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4310_2
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1382..2566
DNA (1185bp) protein (395aa)
Major Facilitator Superfamily n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D8G9_9FIRM
possible sugar permease
Major Facilitator Superfamily {ECO:0000313|EMBL:CDA74147.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_058_000M1_scaffold_4310_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2674..2817)
DNA (144bp) protein (48aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS82_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK95951.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_058_000M1_scaffold_4310_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2827..3546)
DNA (720bp) protein (240aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JS82_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK95951.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_058_000M1_scaffold_4310_5
unknown

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3848..4306
DNA (459bp) protein (153aa)
hypothetical protein predicted by Glimmer/Critica
L3_058_000M1_scaffold_4310_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4471..5451
DNA (981bp) protein (327aa)
Putative lipoprotein n=1 Tax=Ruminococcus albus 8 RepID=E9SDD2_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04641.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4310_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5562..6425
DNA (864bp) protein (288aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SDD3_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04642.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4310_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6429..7301
DNA (873bp) protein (291aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SDD4_RUMAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04643.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4310_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7311..7430
DNA (120bp) protein (40aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATPase component {ECO:0000313|EMBL:CCO04644.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO04644.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Bacitracin ABC transporter, ATP-binding protein BcrA family protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCN7_RUMAL
Displaying 9 items

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