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L3_058_000M1_scaffold_4548

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_4548_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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76..1521
DNA (1446bp) protein (482aa)
atpD; ATP synthase F1, beta subunit (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ATP synthase subunit beta n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE54_9FIRM
L3_058_000M1_scaffold_4548_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1549..1974
DNA (426bp) protein (142aa)
atpC; ATP synthase F1, epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5P8_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4548_3
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2214..2723
DNA (510bp) protein (170aa)
50S ribosomal protein L10 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SY91_9FIRM
rplJ; ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4548_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2790..3161
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8V6_9FIRM
rpsD; ribosomal protein S4
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_058_000M1_scaffold_4548_5
unknown

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comp(4167..4325)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_058_000M1_scaffold_4548_6
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4396..5040
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1S6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66145.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_058_000M1_scaffold_4548_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5155..5724)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66146.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_058_000M1_scaffold_4548_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5958..7100
DNA (1143bp) protein (381aa)
Site-specific recombinase phage integrase family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5Q2_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC66147.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Putative bacteriophage integrase
Displaying 8 items

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