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L3_058_000M1_scaffold_2016

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_2016_1
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..390)
DNA (390bp) protein (130aa)
recombinase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C94
Plasmid recombination protein {ECO:0000313|EMBL:CCY20836.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
plasmid recombination protein
L3_058_000M1_scaffold_2016_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(706..2130)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UHI1_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU21226.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L3_058_000M1_scaffold_2016_3
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2357..3046
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FEP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE12988.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
helix-turn-helix domain-containing protein
L3_058_000M1_scaffold_2016_4
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3342..4826
DNA (1485bp) protein (495aa)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:AEC01480.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AEC01480.1};; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKS1_SPICD
adenine-specific DNA-methyltransferase
L3_058_000M1_scaffold_2016_5
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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4823..5743
DNA (921bp) protein (307aa)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:AEC01481.1}; EC=3.1.21.4 {ECO:0000313|EMBL:AEC01481.1};; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Type II site-specific deoxyribonuclease n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKS2_SPICD
type II site-specific deoxyribonuclease
L3_058_000M1_scaffold_2016_6
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5756..6532
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BSL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX55722.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L3_058_000M1_scaffold_2016_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6532..7695
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AEL0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74659.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATPase AAA
L3_058_000M1_scaffold_2016_8
Thermoanaerobacter sp. X514, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7674..8606
DNA (933bp) protein (311aa)
Uncharacterized protein n=3 Tax=Thermoanaerobacter RepID=B0K6N5_THEPX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY92511.1}; TaxID=399726 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. (strain X514).;"
L3_058_000M1_scaffold_2016_9
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9077..10183
DNA (1107bp) protein (369aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TE71_9FIRM
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:CDC66161.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_058_000M1_scaffold_2016_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10144..12540
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66162.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_058_000M1_scaffold_2016_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12537..13679
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66163.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_058_000M1_scaffold_2016_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13691..15205
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T8X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66164.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
Displaying 12 items

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