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L3_058_000M1_scaffold_3475

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_3475_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35..223)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0P0P8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS21774.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_058_000M1_scaffold_3475_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(235..1620)
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJ21_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EET59341.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative efflux protein, MATE family
L3_058_000M1_scaffold_3475_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1743..2270
DNA (528bp) protein (176aa)
Transcriptional regulator, PadR family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJ22_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EET59342.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
transcriptional regulator, PadR family
L3_058_000M1_scaffold_3475_4
unknown

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comp(2312..2500)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P0T0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38258.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_058_000M1_scaffold_3475_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2508..2924)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38071.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_058_000M1_scaffold_3475_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2929..3453)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJ96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46559.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
transcriptional regulator
L3_058_000M1_scaffold_3475_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3527..4258)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C7M7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80520.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hydrolase
L3_058_000M1_scaffold_3475_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4270..4899)
DNA (630bp) protein (210aa)
virginiamycin A acetyltransferase (EC:2.3.1.-)
Putative chloramphenicol O-acetyltransferase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BQU5_CLOSY
Putative chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:ERI80519.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000M1_scaffold_3475_9
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5029..5409)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZYF5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMZ17359.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L3_058_000M1_scaffold_3475_10
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5637..6005
DNA (369bp) protein (123aa)
Helix-turn-helix n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NN38_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CCZ05258.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
Helix-turn-helix.
L3_058_000M1_scaffold_3475_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6031..6252)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2T2_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02922.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_058_000M1_scaffold_3475_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6388..6723
DNA (336bp) protein (112aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3H2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS74206.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Transcriptional regulator, HTH-type
L3_058_000M1_scaffold_3475_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6763..8556)
DNA (1794bp) protein (598aa)
Membrane protein involved in colicin uptake n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L4C2_9FIRM
Membrane protein involved in colicin uptake {ECO:0000313|EMBL:CBL14462.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Membrane protein involved in colicin uptake
L3_058_000M1_scaffold_3475_14
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8592..8975)
DNA (384bp) protein (128aa)
SrtB family sortase n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BBE8_9FIRM
SrtB family sortase {ECO:0000313|EMBL:EHO26689.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
srtB; Sortase B
Displaying 14 items

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