ggKbase home page

L3_058_000M1_scaffold_2122

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000M1_scaffold_2122_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..886
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H2G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27656.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_2122_2
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

891..1787
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CSY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX71000.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L3_058_000M1_scaffold_2122_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1780..2613
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GTB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27655.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Protein of unknown function (DUF3137).
L3_058_000M1_scaffold_2122_4
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

2618..2800
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LXA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86796.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_058_000M1_scaffold_2122_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2926..4653)
DNA (1728bp) protein (576aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNX1_9FIRM
Phosphoglucomutase {ECO:0000313|EMBL:CDB27582.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_2122_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4676..4990)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H299_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27581.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_2122_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5016..5498)
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GT62_9FIRM
hypothetical protein
L3_058_000M1_scaffold_2122_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5486..6277)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27579.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_2122_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6351..7646)
DNA (1296bp) protein (432aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ88_9FIRM
L3_058_000M1_scaffold_2122_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

8028..8459
DNA (432bp) protein (144aa)
Putative Trk system potassium uptake protein TrkH n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCS0_9FIRM
Putative Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:CCX73701.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
cation transporter
L3_058_000M1_scaffold_2122_11
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8477..9058
DNA (582bp) protein (194aa)
Putative purine catabolism protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ80_9FIRM
Putative purine catabolism protein {ECO:0000313|EMBL:CDB26535.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative purine catabolism protein
L3_058_000M1_scaffold_2122_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9301..9747
DNA (447bp) protein (149aa)
Hsp20/alpha crystallin family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GXV5_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDB26534.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Molecular chaperone (small heat shock protein)
L3_058_000M1_scaffold_2122_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9986..11530
DNA (1545bp) protein (515aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GM69_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB26533.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_058_000M1_scaffold_2122_14
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

11662..12168
DNA (507bp) protein (169aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHF5_9FIRM
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CCX91853.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_058_000M1_scaffold_2122_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12301..13281
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
6-phosphofructokinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZV7_9FIRM
6-phosphofructokinase
L3_058_000M1_scaffold_2122_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13325..13924)
DNA (600bp) protein (200aa)
UPF0340 protein Fisuc_3075 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZI4_9FIRM
UPF0340 protein BN557_00722 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_058_000M1_scaffold_2122_17
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13969..14379)
DNA (411bp) protein (137aa)
Predicted membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0V7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDB27116.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Predicted membrane protein
Displaying 17 items

View Taxonomy